Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d012103_P001 | cytosol, cytosol, mitochondrion |
| Zm00001d042453_P001 | cytosol, cytosol, mitochondrion |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d049641_P001 | Maize | plasma membrane, plastid | 93.98 | 97.33 |
| KXG24320 | Sorghum | cytosol | 93.98 | 97.33 |
| TraesCS7D01G309500.1 | Wheat | cytosol | 91.4 | 94.66 |
| TraesCS7B01G213300.1 | Wheat | golgi | 91.4 | 94.66 |
| Os08t0126300-01 | Rice | cytosol | 89.68 | 92.88 |
| TraesCS7A01G313100.1 | Wheat | cytosol | 87.68 | 88.7 |
| Zm00001d051001_P002 | Maize | cytosol | 84.53 | 87.54 |
| Bra016729.1-P | Field mustard | cytosol | 83.95 | 86.43 |
| CDY49358 | Canola | cytosol, mitochondrion | 83.09 | 86.31 |
| Solyc06g071920.2.1 | Tomato | nucleus | 83.09 | 86.05 |
| Bra026904.1-P | Field mustard | cytosol | 83.09 | 85.8 |
| Bra040213.1-P | Field mustard | cytosol | 83.09 | 85.8 |
| PGSC0003DMT400069357 | Potato | cytosol | 82.81 | 85.76 |
| AT3G04120.1 | Thale cress | cytosol | 82.81 | 85.5 |
| KRG97466 | Soybean | endoplasmic reticulum, nucleus | 83.09 | 85.29 |
| AT1G13440.1 | Thale cress | cytosol | 82.52 | 85.21 |
| KRH31426 | Soybean | endoplasmic reticulum | 82.81 | 85.0 |
| Bra040146.1-P | Field mustard | cytosol | 82.23 | 84.91 |
| VIT_01s0010g02460.t01 | Wine grape | cytosol | 82.52 | 84.71 |
| Bra019722.1-P | Field mustard | cytosol | 71.06 | 84.35 |
| VIT_17s0000g10430.t01 | Wine grape | extracellular | 81.38 | 84.27 |
| PGSC0003DMT400044944 | Potato | extracellular | 81.38 | 84.02 |
| Solyc05g014470.2.1 | Tomato | extracellular, plastid | 81.09 | 83.73 |
| KRH63724 | Soybean | nucleus | 80.52 | 83.14 |
| Solyc03g111010.2.1 | Tomato | plastid | 80.23 | 83.09 |
| PGSC0003DMT400039449 | Potato | extracellular | 80.23 | 83.09 |
| CDX92059 | Canola | cytosol, endoplasmic reticulum, peroxisome | 82.81 | 83.05 |
| KRH63725 | Soybean | endoplasmic reticulum, nucleus | 80.23 | 82.84 |
| KRH54227 | Soybean | endoplasmic reticulum, nucleus | 80.23 | 82.84 |
| KRH54234 | Soybean | endoplasmic reticulum, nucleus | 79.94 | 82.54 |
| CDY42906 | Canola | cytosol | 82.81 | 81.87 |
| CDX74199 | Canola | endoplasmic reticulum | 82.52 | 81.82 |
| HORVU7Hr1G074690.3 | Barley | extracellular, plasma membrane | 91.4 | 81.17 |
| CDY50169 | Canola | cytosol | 83.67 | 78.49 |
| CDY21098 | Canola | cytosol | 83.67 | 78.28 |
| CDX98100 | Canola | cytosol, mitochondrion, peroxisome | 71.06 | 77.99 |
| CDY26651 | Canola | mitochondrion, peroxisome | 71.06 | 74.47 |
| CDY30032 | Canola | cytosol | 83.38 | 74.05 |
| CDY21135 | Canola | cytosol, mitochondrion, peroxisome, plastid | 71.06 | 72.73 |
| PGSC0003DMT400044945 | Potato | cytosol | 34.38 | 67.8 |
| CDY16090 | Canola | cytoskeleton, cytosol, peroxisome | 83.38 | 67.67 |
| CDY29987 | Canola | cytosol, peroxisome, plastid | 71.06 | 65.96 |
| Zm00001d015383_P001 | Maize | plastid | 71.35 | 59.43 |
| Zm00001d053798_P004 | Maize | plastid | 69.05 | 58.07 |
| Zm00001d017121_P001 | Maize | plastid | 84.53 | 57.84 |
| KRH37937 | Soybean | plastid | 12.32 | 48.86 |
| Zm00001d025607_P001 | Maize | cytosol, plastid | 42.12 | 39.52 |
| Zm00001d003429_P001 | Maize | plastid | 45.27 | 39.21 |
| Zm00001d025593_P001 | Maize | plastid | 42.41 | 36.72 |
| Zm00001d025599_P001 | Maize | plastid | 42.12 | 36.48 |
| Zm00001d025601_P001 | Maize | plastid | 17.77 | 36.26 |
| Zm00001d027488_P001 | Maize | extracellular, plastid | 45.56 | 35.41 |
| Zm00001d019945_P001 | Maize | plastid | 10.32 | 32.43 |
| Zm00001d015885_P001 | Maize | mitochondrion | 14.04 | 32.24 |
| Zm00001d021798_P001 | Maize | cytosol | 23.78 | 31.92 |
| Zm00001d016297_P001 | Maize | cytosol | 10.89 | 27.74 |
Protein Annotations
| KEGG:00010+1.2.1.12 | KEGG:00710+1.2.1.12 | MapMan:2.1.1.4.1 | Gene3D:3.30.360.10 | Gene3D:3.40.50.720 | EntrezGene:542718 |
| UniProt:A0A1D6LER3 | ProteinID:AQK78435.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005975 | GO:GO:0006006 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0016620 |
| GO:GO:0050661 | GO:GO:0051287 | GO:GO:0055114 | InterPro:GlycerAld/Erythrose_P_DH | InterPro:GlycerAld_3-P_DH_AS | InterPro:GlycerAld_3-P_DH_NAD(P)-bd |
| InterPro:GlycerAld_3-P_DH_cat | InterPro:Glyceraldehyde-3-P_DH_1 | InterPro:NAD(P)-bd_dom_sf | PFAM:PF00044 | PFAM:PF02800 | PIRSF:PIRSF000149 |
| PRINTS:PR00078 | ScanProsite:PS00071 | PANTHER:PTHR10836 | PANTHER:PTHR10836:SF58 | SMART:SM00846 | SUPFAM:SSF51735 |
| SUPFAM:SSF55347 | TIGRFAMs:TIGR01534 | UniParc:UPI000843AD5D | EnsemblPlantsGene:Zm00001d035156 | EnsemblPlants:Zm00001d035156_P003 | EnsemblPlants:Zm00001d035156_T003 |
| SEG:seg | : | : | : | : | : |
Description
glyceraldehyde-3-phosphate dehydrogenase2Glyceraldehyde-3-phosphate dehydrogenase 2%2C cytosolic
Coordinates
chr6:+:7238033..7242155
Molecular Weight (calculated)
37896.4 Da
IEP (calculated)
6.891
GRAVY (calculated)
-0.062
Length
349 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKIKIGING FGRIGRLVAR VALQSEDVEL VAVNDPFITT DYMTYMFKYD TVHGQWKHSD IALKDSKTLL FGEKPVTVFG IRNPEEIPWG EAGAEYVVES
101: TGVFTDKDKA AAHLKGGAKK VVISAPSKDA PMFVVGVNED KYTSDVNIVS NASCTTNCLA PLAKVIHDNF GIIEGLMTTV HAITATQKTV DGPSAKDWRG
201: GRAASFNIIP SSTGAAKLRV LTSNIDVLQA VGKVLPELNG KLTGMSFRVP TVDVSVVDLT VRIEKGASYE EIKKAIKAAS EGPLKGIMGY VEEDLVSTDF
301: TGDSRSSIFD AKAGIALNDH FIKLVSWYDN EWGYSNRVVD LIRHMFKTQ
101: TGVFTDKDKA AAHLKGGAKK VVISAPSKDA PMFVVGVNED KYTSDVNIVS NASCTTNCLA PLAKVIHDNF GIIEGLMTTV HAITATQKTV DGPSAKDWRG
201: GRAASFNIIP SSTGAAKLRV LTSNIDVLQA VGKVLPELNG KLTGMSFRVP TVDVSVVDLT VRIEKGASYE EIKKAIKAAS EGPLKGIMGY VEEDLVSTDF
301: TGDSRSSIFD AKAGIALNDH FIKLVSWYDN EWGYSNRVVD LIRHMFKTQ
001: MADKKIRIGI NGFGRIGRLV ARVVLQRDDV ELVAVNDPFI TTEYMTYMFK YDSVHGQWKH HELKVKDDKT LLFGEKPVTV FGIRNPEDIP WGEAGADFVV
101: ESTGVFTDKD KAAAHLKGGA KKVVISAPSK DAPMFVVGVN EHEYKSDLDI VSNASCTTNC LAPLAKVIND RFGIVEGLMT TVHSITATQK TVDGPSMKDW
201: RGGRAASFNI IPSSTGAAKA VGKVLPSLNG KLTGMSFRVP TVDVSVVDLT VRLEKAATYD EIKKAIKEES EGKMKGILGY TEDDVVSTDF VGDNRSSIFD
301: AKAGIALSDK FVKLVSWYDN EWGYSSRVVD LIVHMSKA
101: ESTGVFTDKD KAAAHLKGGA KKVVISAPSK DAPMFVVGVN EHEYKSDLDI VSNASCTTNC LAPLAKVIND RFGIVEGLMT TVHSITATQK TVDGPSMKDW
201: RGGRAASFNI IPSSTGAAKA VGKVLPSLNG KLTGMSFRVP TVDVSVVDLT VRLEKAATYD EIKKAIKEES EGKMKGILGY TEDDVVSTDF VGDNRSSIFD
301: AKAGIALSDK FVKLVSWYDN EWGYSSRVVD LIVHMSKA
Arabidopsis Description
GAPC2Glyceraldehyde-3-phosphate dehydrogenase GAPC2, cytosolic [Source:UniProtKB/Swiss-Prot;Acc:Q9FX54]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.