CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 5
mitochondrion 4
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
EpiLoc:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Plant-mPloc:	cytosol, mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d015383_P001	Maize	plastid	95.64	94.27
Os02t0171100-01	Rice	extracellular, plastid	92.98	93.43
TraesCS6D01G146900.1	Wheat	plastid	93.7	93.03
GSMUA_Achr5P00240_001	Banana	cytosol	46.97	92.82
TraesCS6A01G157500.1	Wheat	plastid	93.22	92.55
TraesCS6B01G185400.1	Wheat	plastid	92.49	91.83
HORVU6Hr1G032070.2	Barley	plastid	91.28	90.62
Zm00001d053798_P004	Maize	plastid	88.62	88.19
Solyc10g005510.2.1	Tomato	plastid	79.42	78.28
Bra008416.1-P	Field mustard	plastid	77.97	77.59
CDX79324	Canola	plastid	78.93	77.43
CDY25342	Canola	plastid	77.72	77.35
PGSC0003DMT400029242	Potato	plastid	78.45	77.33
CDX67990	Canola	plastid	78.69	77.2
CDY22281	Canola	plastid	77.97	76.85
AT1G79530.1	Thale cress	plastid	78.45	76.78
AT1G16300.1	Thale cress	plastid	77.48	76.19
KRH66238	Soybean	plastid	77.0	76.08
VIT_19s0085g00600.t01	Wine grape	plastid	78.93	75.99
Bra003606.1-P	Field mustard	plastid	78.45	75.88
KRH07324	Soybean	extracellular, nucleus	76.51	75.6
Bra026068.1-P	Field mustard	plastid	77.48	75.47
CDY33343	Canola	plastid	77.72	75.35
CDY35080	Canola	plastid	77.48	75.12
KXG20851	Sorghum	cytosol	60.29	73.89
KXG24320	Sorghum	cytosol	60.29	73.89
EES05377	Sorghum	cytosol	60.05	73.59
KXG21112	Sorghum	cytosol	59.81	73.29
OQU77089	Sorghum	cytosol	23.73	72.06
OQU77090	Sorghum	cytosol	36.32	67.57
GSMUA_Achr5P00230_001	Banana	plastid	30.51	57.27
GSMUA_Achr2P02630_001	Banana	endoplasmic reticulum, extracellular	13.32	41.35
KXG40264	Sorghum	plastid	43.58	40.54
KXG26468	Sorghum	plastid	40.44	39.95
KXG19697	Sorghum	cytosol	9.2	39.18
KXG28726	Sorghum	cytosol	13.08	35.53

Protein Annotations

KEGG:00010+1.2.1.12	KEGG:00710+1.2.1.12	MapMan:3.12.4	Gene3D:3.30.360.10	Gene3D:3.40.50.720	EntrezGene:8076121
UniProt:C5XW45	EnsemblPlants:EES04595	ProteinID:EES04595	ProteinID:EES04595.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005975	GO:GO:0006006	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0016620	GO:GO:0050661	GO:GO:0051287	GO:GO:0055114	InterPro:GlycerAld/Erythrose_P_DH
InterPro:GlycerAld_3-P_DH_AS	InterPro:GlycerAld_3-P_DH_NAD(P)-bd	InterPro:GlycerAld_3-P_DH_cat	InterPro:Glyceraldehyde-3-P_DH_1	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00044
PFAM:PF02800	PRINTS:PR00078	ScanProsite:PS00071	PANTHER:PTHR10836	PANTHER:PTHR10836:SF46	MetaCyc:PWY-1042
MetaCyc:PWY-5484	MetaCyc:PWY-6901	MetaCyc:PWY-7003	SMART:SM00846	EnsemblPlantsGene:SORBI_3004G056400	SUPFAM:SSF51735
SUPFAM:SSF55347	unigene:Sbi.3569	TIGRFAMs:TIGR01534	UniParc:UPI0001A855DE	RefSeq:XP_002451619.1	SEG:seg

Description

hypothetical protein

Coordinates

chr4:+:4540873..4546266

Molecular Weight (calculated)

43456.9 Da

IEP (calculated)

8.868

GRAVY (calculated)

0.003

Length

413 amino acids

Sequence
(BLAST)

001: MAALSVPLRA AAVAAGSRAA GADPVKVLCV RSTGSAHFGC AFPSITASSS VARNIEPLRA IATQAPPAVP QYSSGEKTKI GINGFGRIGR LVLRIATSRD
101: DIEVVAVNDP FVDAKYMAYM FKYDSTHGPF KGSIRVVDDS TLEINGKKVT ITSKRDPTEI PWGNFGAEYV VESSGVFTTI DKASAHLKGG AKKVVISAPS
201: ADAPMFVVGV NEKSYDPKMN VVSNASCTTN CLAPLAKVVH EEFGIVEGLM TTVHATTATQ KTVDGPSMKD WRGGRGAGQN IIPSSTGAAK AVGKVLPELN
301: GKLTGMAFRV PTPNVSVVDL TCRIEKSASY DDVKAAIKAA SEGALKGILG YTDEDVVSND FVGDSRSSIF DAKAGIGLSS SFMKLVSWYD NEWGYSNRVL
401: DLIAHMALVS AKH

Best Arabidopsis Sequence Match ( AT1G79530.1 )
(BLAST)

001: MAFSSLLRSA ASYTVAAPRP DFFSSPASDH SKVLSSLGFS RNLKPSRFSS GISSSLQNGN ARSVQPIKAT ATEVPSAVRR SSSSGKTKVG INGFGRIGRL
101: VLRIATSRDD IEVVAVNDPF IDAKYMAYML KYDSTHGNFK GSINVIDDST LEINGKKVNV VSKRDPSEIP WADLGADYVV ESSGVFTTLS KAASHLKGGA
201: KKVIISAPSA DAPMFVVGVN EHTYQPNMDI VSNASCTTNC LAPLAKVVHE EFGILEGLMT TVHATTATQK TVDGPSMKDW RGGRGASQNI IPSSTGAAKA
301: VGKVLPELNG KLTGMAFRVP TSNVSVVDLT CRLEKGASYE DVKAAIKHAS EGPLKGILGY TDEDVVSNDF VGDSRSSIFD ANAGIGLSKS FVKLVSWYDN
401: EWGYSNRVLD LIEHMALVAA SH

Arabidopsis Description

GAPCP1Glyceraldehyde-3-phosphate dehydrogenase GAPCP1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SAJ6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.