Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- nucleus 1
- extracellular 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G042230.5 | Barley | extracellular | 82.69 | 81.13 |
| HORVU2Hr1G051210.1 | Barley | extracellular | 71.15 | 79.57 |
| HORVU4Hr1G053830.3 | Barley | extracellular | 78.85 | 78.85 |
| TraesCS7A01G207600.1 | Wheat | cytosol | 36.54 | 55.88 |
| HORVU2Hr1G080550.1 | Barley | cytosol | 33.65 | 46.05 |
| TraesCS7D01G210100.1 | Wheat | endoplasmic reticulum, extracellular, nucleus | 52.88 | 40.15 |
| TraesCS7B01G114500.1 | Wheat | extracellular | 51.92 | 39.42 |
| OQU84365 | Sorghum | cytosol, plastid, vacuole | 41.35 | 34.96 |
| Zm00001d015276_P001 | Maize | cytosol, endoplasmic reticulum, nucleus | 42.31 | 31.88 |
| HORVU5Hr1G103960.1 | Barley | extracellular | 35.58 | 26.43 |
| HORVU5Hr1G115870.1 | Barley | extracellular | 34.62 | 24.0 |
| GSMUA_Achr7P18760_001 | Banana | cytosol, extracellular, mitochondrion | 38.46 | 23.81 |
| HORVU2Hr1G002720.1 | Barley | extracellular | 30.77 | 23.53 |
| HORVU4Hr1G085480.3 | Barley | cytosol, plastid | 35.58 | 21.26 |
| Os06t0266266-00 | Rice | mitochondrion | 44.23 | 19.74 |
| HORVU5Hr1G115750.1 | Barley | plastid | 33.65 | 18.82 |
| HORVU2Hr1G008230.1 | Barley | cytosol, mitochondrion, plasma membrane | 31.73 | 18.54 |
| HORVU5Hr1G115900.1 | Barley | cytosol | 33.65 | 18.04 |
| HORVU5Hr1G115880.1 | Barley | cytosol, mitochondrion, plastid | 33.65 | 16.05 |
| HORVU3Hr1G037940.1 | Barley | cytosol | 25.0 | 14.13 |
Protein Annotations
| EnsemblPlants:HORVU4Hr1G032480.4 | EnsemblPlantsGene:HORVU4Hr1G032480 | InterPro:PLAC_motif_containing | PANTHER:PTHR15907 | PANTHER:PTHR15907:SF92 | PFAM:PF04749 |
| TIGRFAMs:TIGR01571 | UniParc:UPI000B46C088 | UniProt:A0A287NQN7 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chrchr4H:+:222942540..222945811
Molecular Weight (calculated)
11957.7 Da
IEP (calculated)
8.561
GRAVY (calculated)
0.030
Length
104 amino acids
Sequence
(BLAST)
(BLAST)
001: MGPCMFAWRV GCNWLYSCIK RSAMRSQYNL KASPCIDCCI HFFCKGCALC QEYKELVNRG FNMAKGSHVL HGVNVMHAWC SPCRLTSWYP LVHQSWKLQS
101: ADIC
101: ADIC
001: MASQHLQANP HAEGEWSTGF CDCFSDCQNC CITWLCPCIT FGQVADIVDR GNTSCGTAGA LYVLLAAITG CGCLYSCIYR GKIRAQYNIR GDGCTDCLKH
101: FCCELCALTQ EYRELKHRGF DMSLGWAGNV EKQQNQGGVA MGAPAFQGGM SR
101: FCCELCALTQ EYRELKHRGF DMSLGWAGNV EKQQNQGGVA MGAPAFQGGM SR
Arabidopsis Description
PCR3Protein PLANT CADMIUM RESISTANCE 3 [Source:UniProtKB/Swiss-Prot;Acc:P0CW97]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.