Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G051210.1 | Barley | extracellular | 79.25 | 90.32 |
| HORVU4Hr1G053830.3 | Barley | extracellular | 86.79 | 88.46 |
| HORVU4Hr1G032480.4 | Barley | mitochondrion | 81.13 | 82.69 |
| TraesCS7A01G207600.1 | Wheat | cytosol | 39.62 | 61.76 |
| HORVU2Hr1G080550.1 | Barley | cytosol | 34.91 | 48.68 |
| TraesCS7D01G210100.1 | Wheat | endoplasmic reticulum, extracellular, nucleus | 57.55 | 44.53 |
| TraesCS7B01G114500.1 | Wheat | extracellular | 56.6 | 43.8 |
| OQU84365 | Sorghum | cytosol, plastid, vacuole | 44.34 | 38.21 |
| Zm00001d015276_P001 | Maize | cytosol, endoplasmic reticulum, nucleus | 43.4 | 33.33 |
| HORVU5Hr1G103960.1 | Barley | extracellular | 37.74 | 28.57 |
| HORVU5Hr1G115870.1 | Barley | extracellular | 37.74 | 26.67 |
| HORVU2Hr1G002720.1 | Barley | extracellular | 32.08 | 25.0 |
| GSMUA_Achr7P18760_001 | Banana | cytosol, extracellular, mitochondrion | 38.68 | 24.4 |
| HORVU4Hr1G085480.3 | Barley | cytosol, plastid | 37.74 | 22.99 |
| Os06t0266266-00 | Rice | mitochondrion | 49.06 | 22.32 |
| HORVU5Hr1G115750.1 | Barley | plastid | 37.74 | 21.51 |
| HORVU2Hr1G008230.1 | Barley | cytosol, mitochondrion, plasma membrane | 34.91 | 20.79 |
| HORVU5Hr1G115900.1 | Barley | cytosol | 36.79 | 20.1 |
| HORVU5Hr1G115880.1 | Barley | cytosol, mitochondrion, plastid | 34.91 | 16.97 |
| HORVU3Hr1G037940.1 | Barley | cytosol | 23.58 | 13.59 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G042230.5 | EnsemblPlantsGene:HORVU7Hr1G042230 | InterPro:PLAC_motif_containing | PANTHER:PTHR15907 | PANTHER:PTHR15907:SF92 | PFAM:PF04749 |
| TIGRFAMs:TIGR01571 | UniParc:UPI000B46DA2A | UniProt:A0A287W7R0 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chrchr7H:-:121493887..121497627
Molecular Weight (calculated)
12163.8 Da
IEP (calculated)
7.958
GRAVY (calculated)
0.072
Length
106 amino acids
Sequence
(BLAST)
(BLAST)
001: MNGTLYVCLA CVGCNWLYSC TKRSAMRSQY NLKASPCIDC CVHFFCESCA LCQEYKELEN RGFNMAKGNR VLHVVYVMHA WCSPCTLTSW YPLVHQSWKL
101: QSADIC
101: QSADIC
001: MASQHLQANP HAEGEWSTGF CDCFSDCQNC CITWLCPCIT FGQVADIVDR GNTSCGTAGA LYVLLAAITG CGCLYSCIYR GKIRAQYNIR GDGCTDCLKH
101: FCCELCALTQ EYRELKHRGF DMSLGWAGNV EKQQNQGGVA MGAPAFQGGM SR
101: FCCELCALTQ EYRELKHRGF DMSLGWAGNV EKQQNQGGVA MGAPAFQGGM SR
Arabidopsis Description
PCR3Protein PLANT CADMIUM RESISTANCE 3 [Source:UniProtKB/Swiss-Prot;Acc:P0CW97]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.