Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, extracellular, cytosol
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 4
- golgi 2
- plastid 1
- cytosol 1
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS3B01G549100.1 | Wheat | extracellular | 41.07 | 58.97 |
TraesCS3B01G548900.1 | Wheat | extracellular | 41.07 | 58.97 |
TraesCS7A01G207500.1 | Wheat | extracellular | 39.29 | 56.41 |
TraesCS3D01G494900.1 | Wheat | extracellular | 39.29 | 55.93 |
OQU84365 | Sorghum | cytosol, plastid, vacuole | 40.48 | 55.28 |
GSMUA_Achr7P18750_001 | Banana | cytosol, extracellular, plasma membrane | 57.74 | 53.3 |
TraesCS7A01G207600.1 | Wheat | cytosol | 21.43 | 52.94 |
GSMUA_Achr9P27300_001 | Banana | cytosol, plastid, vacuole | 54.76 | 52.57 |
TraesCS7D01G210100.1 | Wheat | endoplasmic reticulum, extracellular, nucleus | 42.86 | 52.55 |
TraesCS7B01G114500.1 | Wheat | extracellular | 42.86 | 52.55 |
Zm00001d015276_P001 | Maize | cytosol, endoplasmic reticulum, nucleus | 42.86 | 52.17 |
GSMUA_Achr7P18730_001 | Banana | cytosol, extracellular, plastid | 55.36 | 51.1 |
TraesCS7D01G210000.1 | Wheat | extracellular | 41.67 | 50.36 |
GSMUA_AchrUn_... | Banana | plastid | 51.19 | 46.74 |
GSMUA_Achr6P02280_001 | Banana | cytosol | 48.81 | 45.05 |
HORVU2Hr1G051210.1 | Barley | extracellular | 23.81 | 43.01 |
HORVU4Hr1G053830.3 | Barley | extracellular | 24.4 | 39.42 |
HORVU7Hr1G042230.5 | Barley | extracellular | 24.4 | 38.68 |
HORVU4Hr1G032480.4 | Barley | mitochondrion | 23.81 | 38.46 |
Os06t0266266-00 | Rice | mitochondrion | 44.64 | 32.19 |
GSMUA_Achr6P32110_001 | Banana | extracellular, peroxisome, plasma membrane | 30.95 | 27.66 |
GSMUA_Achr9P05180_001 | Banana | endoplasmic reticulum, extracellular | 22.62 | 24.84 |
GSMUA_Achr5P22960_001 | Banana | plastid | 36.31 | 22.68 |
GSMUA_Achr10P... | Banana | extracellular, plasma membrane | 37.5 | 15.07 |
Protein Annotations
EnsemblPlants:GSMUA_Achr7P18760_001 | EnsemblPlants:GSMUA_Achr7T18760_001 | EnsemblPlantsGene:GSMUA_Achr7G18760_001 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
InterPro:PLAC_motif_containing | PANTHER:PTHR15907 | PANTHER:PTHR15907:SF98 | PFAM:PF04749 | SEG:seg | TIGRFAMs:TIGR01571 |
TMHMM:TMhelix | UniParc:UPI000294D872 | UniProt:M0TIR3 | MapMan:35.1 | : | : |
Description
Uncharacterized protein At1g14870 [Source:GMGC_GENE;Acc:GSMUA_Achr7G18760_001]
Coordinates
chr7:+:21592508..21593268
Molecular Weight (calculated)
18304.2 Da
IEP (calculated)
6.196
GRAVY (calculated)
0.017
Length
168 amino acids
Sequence
(BLAST)
(BLAST)
001: MYPSKVGGPA SAPPVTGVPM AHNAFGGAET QPVWSTGLCD CMDDFGNCCM TCWCPCVTFG RVAEIVDRGT TSCGASGALY ALIMALTGCQ CIYSWFYRTK
101: MRAYYNLPDS PCCDCCVHFC CETCALCQEY RELKNRGFNM ALGWHLNVER EAGGGMTQPP MMQGGMMR
101: MRAYYNLPDS PCCDCCVHFC CETCALCQEY RELKNRGFNM ALGWHLNVER EAGGGMTQPP MMQGGMMR
001: MEAQHLHAKP HAEGEWSTGF CDCFSDCKNC CITFWCPCIT FGQVAEIVDR GSTSCGTAGA LYALIAVVTG CACIYSCFYR GKMRAQYNIK GDDCTDCLKH
101: FCCELCSLTQ QYRELKHRGY DMSLGWAGNV ERQQNQGGVA MGAPVFQGGM TR
101: FCCELCSLTQ QYRELKHRGY DMSLGWAGNV ERQQNQGGVA MGAPVFQGGM TR
Arabidopsis Description
PCR2PCR2 [Source:UniProtKB/TrEMBL;Acc:A0A178WDU8]
SUBAcon: [mitochondrion,plasma membrane,cytosol]
SUBAcon: [mitochondrion,plasma membrane,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.