Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 5
- cytosol 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400006535 | Potato | cytosol, extracellular, plastid | 25.28 | 56.67 |
| KRH09890 | Soybean | cytosol | 34.2 | 54.76 |
| PGSC0003DMT400042614 | Potato | cytosol, mitochondrion, peroxisome | 34.2 | 50.27 |
| Solyc06g066590.2.1 | Tomato | cytosol, nucleus, peroxisome | 33.83 | 49.73 |
| Solyc03g120600.2.1 | Tomato | cytosol, peroxisome, plastid | 30.48 | 47.67 |
| VIT_09s0002g04180.t01 | Wine grape | cytosol | 33.83 | 47.15 |
| AT1G52200.1 | Thale cress | plastid | 30.11 | 42.63 |
| Bra018953.1-P | Field mustard | plastid | 29.37 | 42.02 |
| GSMUA_Achr7P18760_001 | Banana | cytosol, extracellular, mitochondrion | 22.68 | 36.31 |
| GSMUA_Achr7P18730_001 | Banana | cytosol, extracellular, plastid | 24.54 | 36.26 |
| GSMUA_Achr9P27300_001 | Banana | cytosol, plastid, vacuole | 22.68 | 34.86 |
| GSMUA_Achr7P18750_001 | Banana | cytosol, extracellular, plasma membrane | 23.42 | 34.62 |
| GSMUA_AchrUn_... | Banana | plastid | 21.19 | 30.98 |
| GSMUA_Achr6P02280_001 | Banana | cytosol | 19.33 | 28.57 |
| GSMUA_Achr10P... | Banana | extracellular, plasma membrane | 39.03 | 25.12 |
| GSMUA_Achr6P32110_001 | Banana | extracellular, peroxisome, plasma membrane | 16.36 | 23.4 |
| GSMUA_Achr9P05180_001 | Banana | endoplasmic reticulum, extracellular | 13.01 | 22.88 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr5P22960_001 | EnsemblPlants:GSMUA_Achr5T22960_001 | EnsemblPlantsGene:GSMUA_Achr5G22960_001 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 |
| GO:GO:0006950 | GO:GO:0006979 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | InterPro:PLAC_motif_containing |
| PANTHER:PTHR15907 | PANTHER:PTHR15907:SF46 | PFAM:PF04749 | TIGRFAMs:TIGR01571 | TMHMM:TMhelix | UniParc:UPI0002965212 |
| UniProt:M0T0X1 | MapMan:35.1 | : | : | : | : |
Description
Putative Uncharacterized protein At1g14870 [Source:GMGC_GENE;Acc:GSMUA_Achr5G22960_001]
Coordinates
chr5:-:24830654..24832870
Molecular Weight (calculated)
29607.5 Da
IEP (calculated)
6.136
GRAVY (calculated)
-0.188
Length
269 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSCGPSLCI CTHQPTNPQT RLLAPSSPPS SCEEIAIDVH EKNKAGVLRY RCLQLLVIVD YKNDYYVYKS GLGLGRCCCH VLAMVEVSSD GTQSDTSPAV
101: TIPPVIGREL VPSSTPGSHA PDEPPSQEEQ KLIGRPWTTA LFDCGDNQTN AVLTAFCPCV TFGQIAEILD EGQTSCTLGS FMYILLVPAL CTCWILGAYY
201: RQQLRKKYNL ISSPAHDRTL HLFCPCCSLC QEFRELHNRG LDPSQGWLGY LAKQQETRTL PPDGQSMDK
101: TIPPVIGREL VPSSTPGSHA PDEPPSQEEQ KLIGRPWTTA LFDCGDNQTN AVLTAFCPCV TFGQIAEILD EGQTSCTLGS FMYILLVPAL CTCWILGAYY
201: RQQLRKKYNL ISSPAHDRTL HLFCPCCSLC QEFRELHNRG LDPSQGWLGY LAKQQETRTL PPDGQSMDK
001: MGRVTTPSEE DSNNGLPVQQ PGTPNQRTRV PVSQFAPPNY QQANVNLSVG RPWSTGLFDC QADQANAVLT TIVPCVTFGQ IAEVMDEGEM TCPLGTFMYL
101: LMMPALCSHW VMGSKYREKM RRKFNLVEAP YSDCASHVLC PCCSLCQEYR ELKIRNLDPS LGWNGILAQG QGQYEREAPS FAPTNQYMSK
101: LMMPALCSHW VMGSKYREKM RRKFNLVEAP YSDCASHVLC PCCSLCQEYR ELKIRNLDPS LGWNGILAQG QGQYEREAPS FAPTNQYMSK
Arabidopsis Description
PCR8Protein PLANT CADMIUM RESISTANCE 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9M815]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.