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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, peroxisome, cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 1
  • plasma membrane 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
  • mitochondrion 1
  • peroxisome 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc06g066590.2.1 Tomato cytosol, nucleus, peroxisome 96.17 96.17
PGSC0003DMT400006535 Potato cytosol, extracellular, plastid 56.83 86.67
KRH09890 Soybean cytosol 60.11 65.48
Bra018953.1-P Field mustard plastid 56.28 54.79
AT1G52200.1 Thale cress plastid 56.83 54.74
VIT_09s0002g04180.t01 Wine grape cytosol 57.38 54.4
PGSC0003DMT400040788 Potato cytosol 14.21 39.39
PGSC0003DMT400033759 Potato cytosol 30.05 38.19
PGSC0003DMT400081921 Potato cytosol, plasma membrane, plastid 32.79 36.59
GSMUA_Achr5P22960_001 Banana plastid 50.27 34.2
PGSC0003DMT400056038 Potato cytosol, extracellular, plastid 27.32 33.56
PGSC0003DMT400075916 Potato cytosol, endoplasmic reticulum, nucleus 31.69 30.53
PGSC0003DMT400072265 Potato mitochondrion 25.68 25.0
GSMUA_Achr10P... Banana extracellular, plasma membrane 49.73 21.77
PGSC0003DMT400014354 Potato cytosol, endoplasmic reticulum, nucleus 39.34 16.82
PGSC0003DMT400014896 Potato nucleus, plastid 20.77 10.03
Protein Annotations
EnsemblPlants:PGSC0003DMT400042614EnsemblPlantsGene:PGSC0003DMG400016529EntrezGene:102604879InterPro:PLAC_motif_containingPANTHER:PTHR15907PANTHER:PTHR15907:SF46
PFAM:PF04749PGSC:PGSC0003DMG400016529RefSeq:XP_006356149.1TIGRFAMs:TIGR01571UniParc:UPI0002968616UniProt:M1BDC6
MapMan:35.1:::::
Description
Uncharacterized Cys-rich domain [Source:PGSC_GENE;Acc:PGSC0003DMG400016529]
Coordinates
chr6:-:49252743..49254335
Molecular Weight (calculated)
20328.3 Da
IEP (calculated)
4.845
GRAVY (calculated)
-0.275
Length
183 amino acids
Sequence
(BLAST)
001: MGRVEANNEE ETSQAESGTE PAASQPQQLQ GVQGVYQSPP HLTIGAPWST GLFDCHLDQT NAVMTAFLPC VTFGQIAEVL DAGQMTCPLG TFIYMLMMPA
101: ICSQWIMGSK YRTQLRQRYN LVEAPYSDMI SHMFCPCCSL CQEFRELRNR GLDPALGWNG IVAQQHYGNQ QVNQAPQVQS MSK
Best Arabidopsis Sequence Match ( AT1G52200.1 )
(BLAST)
001: MGRVTTPSEE DSNNGLPVQQ PGTPNQRTRV PVSQFAPPNY QQANVNLSVG RPWSTGLFDC QADQANAVLT TIVPCVTFGQ IAEVMDEGEM TCPLGTFMYL
101: LMMPALCSHW VMGSKYREKM RRKFNLVEAP YSDCASHVLC PCCSLCQEYR ELKIRNLDPS LGWNGILAQG QGQYEREAPS FAPTNQYMSK
Arabidopsis Description
PCR8Protein PLANT CADMIUM RESISTANCE 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9M815]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.