Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g090730.2.1 | Tomato | plastid | 100.0 | 40.49 |
| PGSC0003DMT400081921 | Potato | cytosol, plasma membrane, plastid | 65.15 | 26.22 |
| GSMUA_Achr6P02280_001 | Banana | cytosol | 71.21 | 25.82 |
| Os02t0763000-01 | Rice | plasma membrane | 69.7 | 25.41 |
| PGSC0003DMT400056038 | Potato | cytosol, extracellular, plastid | 56.06 | 24.83 |
| TraesCS6A01G321000.1 | Wheat | plastid | 69.7 | 24.6 |
| TraesCS6B01G351700.1 | Wheat | plastid | 69.7 | 24.6 |
| TraesCS6D01G300700.1 | Wheat | plastid | 69.7 | 24.6 |
| EES05849 | Sorghum | plastid | 66.67 | 23.4 |
| Zm00001d052171_P001 | Maize | cytosol, mitochondrion, plastid | 66.67 | 23.28 |
| PGSC0003DMT400075916 | Potato | cytosol, endoplasmic reticulum, nucleus | 66.67 | 23.16 |
| PGSC0003DMT400006535 | Potato | cytosol, extracellular, plastid | 39.39 | 21.67 |
| PGSC0003DMT400033759 | Potato | cytosol | 43.94 | 20.14 |
| PGSC0003DMT400042614 | Potato | cytosol, mitochondrion, peroxisome | 39.39 | 14.21 |
| PGSC0003DMT400072265 | Potato | mitochondrion | 37.88 | 13.3 |
| PGSC0003DMT400014354 | Potato | cytosol, endoplasmic reticulum, nucleus | 50.0 | 7.71 |
| PGSC0003DMT400014896 | Potato | nucleus, plastid | 25.76 | 4.49 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400040788 | EnsemblPlantsGene:PGSC0003DMG400015772 | InterPro:PLAC_motif_containing | PANTHER:PTHR15907 | PANTHER:PTHR15907:SF92 | PFAM:PF04749 |
| PGSC:PGSC0003DMG400015772 | TIGRFAMs:TIGR01571 | UniParc:UPI000294AD88 | UniProt:M1BAF1 | MapMan:35.1 | : |
Description
ORFX [Source:PGSC_GENE;Acc:PGSC0003DMG400015772]
Coordinates
chr2:-:43946471..43946989
Molecular Weight (calculated)
7613.2 Da
IEP (calculated)
5.610
GRAVY (calculated)
-0.520
Length
66 amino acids
Sequence
(BLAST)
(BLAST)
1: MRGQYDLEEA PCVDCLVHVF CEPCALCQEY RELKNRGFDM GIGWQANMDR QSRGVTMPPY HAGMTR
001: MYGNGPVFKA EGTSFRDQPY AEQLPQGLWT TGLCDCHEDA HICVQTAIMP CVSFAQNVEI VNRGTIPCMN AGLIHLALGF IGCSWLYAFP NRSRLREHFA
101: LPEEPCRDFL VHLFCTPCAI CQESRELKNR GADPSIGWLS NVEKWSREKV TPPIVVPGMI R
101: LPEEPCRDFL VHLFCTPCAI CQESRELKNR GADPSIGWLS NVEKWSREKV TPPIVVPGMI R
Arabidopsis Description
PCR12Protein PLANT CADMIUM RESISTANCE 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX26]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.