CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

extracellular 1
golgi 1
plasma membrane 2
endoplasmic reticulum 1
vacuole 1
plastid 4
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d052171_P001	Maize	cytosol, mitochondrion, plastid	92.55	92.06
Os02t0763000-01	Rice	plasma membrane	77.66	80.66
TraesCS6A01G321000.1	Wheat	plastid	72.87	73.26
TraesCS6D01G300700.1	Wheat	plastid	72.34	72.73
TraesCS6B01G351700.1	Wheat	plastid	72.34	72.73
PGSC0003DMT400040788	Potato	cytosol	23.4	66.67
GSMUA_Achr6P02280_001	Banana	cytosol	62.23	64.29
Solyc02g090730.2.1	Tomato	plastid	48.4	55.83
VIT_03s0063g00570.t01	Wine grape	cytosol	52.13	54.14
KRH50266	Soybean	cytosol, peroxisome, plastid	51.6	50.26
EES12297	Sorghum	extracellular	40.43	49.35
KRH71150	Soybean	cytosol	50.0	48.21
VIT_03s0063g00550.t01	Wine grape	cytosol	53.72	46.76
EER90575	Sorghum	cytosol, extracellular, mitochondrion	41.49	46.43
EES07039	Sorghum	cytosol, extracellular, mitochondrion	44.15	45.86
OQU90679	Sorghum	endoplasmic reticulum, extracellular	35.64	45.27
KRH71889	Soybean	cytosol	43.09	45.25
VIT_03s0063g00560.t01	Wine grape	cytosol	50.53	43.78
EER90573	Sorghum	extracellular	39.36	42.77
OQU84365	Sorghum	cytosol, plastid, vacuole	27.66	42.28
EES02743	Sorghum	cytosol	27.66	28.42

Protein Annotations

EnsemblPlants:EES05849	EnsemblPlantsGene:SORBI_3004G308100	EntrezGene:8078916	InterPro:PLAC_motif_containing	PANTHER:PTHR15907	PANTHER:PTHR15907:SF95
PFAM:PF04749	ProteinID:EES05849	ProteinID:EES05849.1	RefSeq:XP_002452873.1	SEG:seg	TIGRFAMs:TIGR01571
TMHMM:TMhelix	UniParc:UPI0001A859CC	UniProt:C5XST8	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr4:+:64570470..64571988

Molecular Weight (calculated)

20286.4 Da

IEP (calculated)

6.462

GRAVY (calculated)

-0.161

Length

188 amino acids

Sequence
(BLAST)

001: MYPSAPPDAY SNKFSSSGAP PTAPPPAAYQ QQQHGANMNP SRPGGGLRKW STGLFHCMDD PGNCLITCLC PCITFGQIAD IVDKGTCPCL ASGFIYGLIC
101: ASTGMGCLYS CLYRSKLRAE YDVDEGECPD FLVHCCCEHL ALCQEYRELK NRGFDLGIGW EANMDRQRRG VTGGTVMGAP AIPLGMIR

Best Arabidopsis Sequence Match ( AT5G35525.1 )
(BLAST)

001: MASQHLQANP HAEGEWSTGF CDCFSDCQNC CITWLCPCIT FGQVADIVDR GNTSCGTAGA LYVLLAAITG CGCLYSCIYR GKIRAQYNIR GDGCTDCLKH
101: FCCELCALTQ EYRELKHRGF DMSLGWAGNV EKQQNQGGVA MGAPAFQGGM SR

Arabidopsis Description

PCR3Protein PLANT CADMIUM RESISTANCE 3 [Source:UniProtKB/Swiss-Prot;Acc:P0CW97]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.