Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, extracellular, cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- golgi 1
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d050899_P001 | Maize | cytosol, extracellular, mitochondrion | 89.5 | 89.5 |
| TraesCS1B01G418800.1 | Wheat | cytosol, extracellular, mitochondrion | 82.87 | 81.08 |
| TraesCS1D01G398700.1 | Wheat | cytosol, extracellular, mitochondrion | 81.77 | 80.0 |
| TraesCS1A01G390500.1 | Wheat | cytosol, extracellular, mitochondrion | 82.32 | 79.68 |
| Os02t0579800-01 | Rice | cytosol, extracellular, plastid | 70.72 | 79.01 |
| OQU90679 | Sorghum | endoplasmic reticulum, extracellular | 48.07 | 58.78 |
| EES12297 | Sorghum | extracellular | 48.07 | 56.49 |
| GSMUA_Achr9P27300_001 | Banana | cytosol, plastid, vacuole | 53.04 | 54.86 |
| OQU84365 | Sorghum | cytosol, plastid, vacuole | 35.36 | 52.03 |
| EER90573 | Sorghum | extracellular | 47.51 | 49.71 |
| EER90575 | Sorghum | cytosol, extracellular, mitochondrion | 45.3 | 48.81 |
| EES05849 | Sorghum | plastid | 45.86 | 44.15 |
| EES02743 | Sorghum | cytosol | 29.28 | 28.96 |
Protein Annotations
| EnsemblPlants:EES07039 | EnsemblPlantsGene:SORBI_3004G192100 | EntrezGene:8070557 | InterPro:PLAC_motif_containing | PANTHER:PTHR15907 | PANTHER:PTHR15907:SF98 |
| PFAM:PF04749 | ProteinID:EES07039 | ProteinID:EES07039.1 | RefSeq:XP_002454063.1 | SEG:seg | TIGRFAMs:TIGR01571 |
| UniParc:UPI0001A85D4B | UniProt:C5XVR6 | MapMan:35.1 | : | : | : |
Description
hypothetical protein
Coordinates
chr4:-:54422916..54425126
Molecular Weight (calculated)
19386.5 Da
IEP (calculated)
7.022
GRAVY (calculated)
0.076
Length
181 amino acids
Sequence
(BLAST)
(BLAST)
001: MYPKADEGAQ PLATGIPISG GRGGYYQAGG ATAAFAVQAQ AAPVAAWSTG LCDCFDDCSN CCVTCLCPCI TFGQIAEIID RGSTSCGTSG ALYTLVMLLT
101: GCQCVYSCFY RAKMRAQYGL RESPCADCCV HCCCECCALC QEFRELKKRG FDMNIGWHAN MERQGRTAAT MPPLMHPGMT R
101: GCQCVYSCFY RAKMRAQYGL RESPCADCCV HCCCECCALC QEFRELKKRG FDMNIGWHAN MERQGRTAAT MPPLMHPGMT R
001: MEAQHLHAKP HAEGEWSTGF CDCFSDCKNC CITFWCPCIT FGQVAEIVDR GSTSCGTAGA LYALIAVVTG CACIYSCFYR GKMRAQYNIK GDDCTDCLKH
101: FCCELCSLTQ QYRELKHRGY DMSLGWAGNV ERQQNQGGVA MGAPVFQGGM TR
101: FCCELCSLTQ QYRELKHRGY DMSLGWAGNV ERQQNQGGVA MGAPVFQGGM TR
Arabidopsis Description
PCR2PCR2 [Source:UniProtKB/TrEMBL;Acc:A0A178WDU8]
SUBAcon: [mitochondrion,plasma membrane,cytosol]
SUBAcon: [mitochondrion,plasma membrane,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.