CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 4
endoplasmic reticulum 2
vacuole 2
plasma membrane 3
golgi 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G522100.1	Wheat	endoplasmic reticulum, extracellular	65.58	73.19
TraesCS5D01G436100.1	Wheat	extracellular	66.23	72.86
TraesCS5B01G430000.1	Wheat	cytosol, extracellular, nucleus	66.23	72.86
HORVU5Hr1G103960.1	Barley	extracellular	65.58	72.14
TraesCS2B01G008000.1	Wheat	extracellular	62.34	70.59
HORVU2Hr1G002720.1	Barley	extracellular	61.69	69.85
HORVU2Hr1G080550.1	Barley	cytosol	34.42	69.74
TraesCS5B01G009000.1	Wheat	plastid	68.83	69.28
TraesCS2B01G344100.1	Wheat	cytosol	62.99	68.79
TraesCS2D01G325100.1	Wheat	endoplasmic reticulum, extracellular	42.21	67.71
TraesCS2D01G017200.1	Wheat	extracellular	37.01	66.28
TraesCS2D01G017300.1	Wheat	cytosol, extracellular, nucleus	62.34	66.21
TraesCS2B01G007900.1	Wheat	extracellular, vacuole	61.04	65.73
TraesCS2B01G008100.1	Wheat	extracellular	61.69	65.52
TraesCSU01G147400.1	Wheat	extracellular, golgi	59.74	64.34
TraesCS2A01G016000.1	Wheat	endoplasmic reticulum, extracellular	58.44	64.29
TraesCS2A01G016100.1	Wheat	extracellular	60.39	63.7
Os04t0461600-01	Rice	cytosol	71.43	61.45
HORVU4Hr1G085480.3	Barley	cytosol, plastid	66.23	58.62
OQU84365	Sorghum	cytosol, plastid, vacuole	44.16	55.28
TraesCS5A01G428100.1	Wheat	plastid	33.77	50.98
OQU90679	Sorghum	endoplasmic reticulum, extracellular	48.7	50.68
EES07039	Sorghum	cytosol, extracellular, mitochondrion	56.49	48.07
EER90573	Sorghum	extracellular	53.9	47.98
TraesCS2D01G017100.1	Wheat	cytosol, extracellular, plastid	41.56	47.41
EER90575	Sorghum	cytosol, extracellular, mitochondrion	50.65	46.43
KRH49878	Soybean	endoplasmic reticulum	43.51	42.14
EES05849	Sorghum	plastid	49.35	40.43
EES02743	Sorghum	cytosol	38.31	32.24

Protein Annotations

EnsemblPlants:EES12297	EnsemblPlantsGene:SORBI_3006G107900	EntrezGene:8073440	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:PLAC_motif_containing	PANTHER:PTHR15907	PANTHER:PTHR15907:SF92	PFAM:PF04749	ProteinID:EES12297	ProteinID:EES12297.1
RefSeq:XP_002447969.1	SEG:seg	TIGRFAMs:TIGR01571	TMHMM:TMhelix	UniParc:UPI0001A87009	UniProt:C5Y9V9
MapMan:35.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:-:47754381..47756420

Molecular Weight (calculated)

16231.5 Da

IEP (calculated)

6.414

GRAVY (calculated)

0.153

Length

154 amino acids

Sequence
(BLAST)

001: MANNAAFGVQ GNAAAAGAWS SGLCDCFDDV GGCCLTFFCP CVTFGRIAHI VDQGGSSCCV SGSLYMLLAS VTGLGACLYS CIYRSKLRSQ YGLTEKPCAD
101: CCVHLCCEAC ALCQEYRELK ARGFDMSAGW QDNMERMGKG AVTAPPQPNP GMSR

Best Arabidopsis Sequence Match ( AT5G35525.1 )
(BLAST)

001: MASQHLQANP HAEGEWSTGF CDCFSDCQNC CITWLCPCIT FGQVADIVDR GNTSCGTAGA LYVLLAAITG CGCLYSCIYR GKIRAQYNIR GDGCTDCLKH
101: FCCELCALTQ EYRELKHRGF DMSLGWAGNV EKQQNQGGVA MGAPAFQGGM SR

Arabidopsis Description

PCR3Protein PLANT CADMIUM RESISTANCE 3 [Source:UniProtKB/Swiss-Prot;Acc:P0CW97]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.