Subcellular Localization
min:
: max
Winner_takes_all: extracellular, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G436100.1 | Wheat | extracellular | 98.57 | 98.57 |
| HORVU5Hr1G103960.1 | Barley | extracellular | 96.43 | 96.43 |
| TraesCS2B01G344100.1 | Wheat | cytosol | 72.86 | 72.34 |
| TraesCS2B01G007900.1 | Wheat | extracellular, vacuole | 72.14 | 70.63 |
| TraesCS2B01G008000.1 | Wheat | extracellular | 68.57 | 70.59 |
| EES12297 | Sorghum | extracellular | 72.86 | 66.23 |
| TraesCS2B01G008100.1 | Wheat | extracellular | 67.86 | 65.52 |
| TraesCS5B01G009000.1 | Wheat | plastid | 70.71 | 64.71 |
| TraesCS5A01G428100.1 | Wheat | plastid | 47.14 | 64.71 |
| Os04t0461600-01 | Rice | cytosol | 77.14 | 60.34 |
| TraesCS3B01G549100.1 | Wheat | extracellular | 44.29 | 52.99 |
| TraesCS3B01G548900.1 | Wheat | extracellular | 44.29 | 52.99 |
| TraesCS7B01G114500.1 | Wheat | extracellular | 51.43 | 52.55 |
| TraesCS5B01G507600.1 | Wheat | cytosol, extracellular, plastid | 51.43 | 46.75 |
| TraesCS5B01G507700.1 | Wheat | extracellular | 51.43 | 45.57 |
| TraesCS1B01G418800.1 | Wheat | cytosol, extracellular, mitochondrion | 59.29 | 44.86 |
| TraesCS7B01G431900.1 | Wheat | cytosol, nucleus, vacuole | 51.43 | 43.11 |
| TraesCS6B01G351700.1 | Wheat | plastid | 55.71 | 41.71 |
| TraesCS5B01G507500.1 | Wheat | plastid | 52.86 | 41.57 |
| KRH49878 | Soybean | endoplasmic reticulum | 43.57 | 38.36 |
| TraesCS7B01G066400.1 | Wheat | cytosol, peroxisome, plastid | 42.14 | 31.72 |
| TraesCS7B01G066300.1 | Wheat | cytosol, peroxisome, plastid | 41.43 | 31.18 |
| TraesCS3B01G214000.1 | Wheat | cytosol | 38.57 | 29.35 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G430000.1 | EnsemblPlantsGene:TraesCS5B01G430000 | InterPro:PLAC_motif_containing | PANTHER:PTHR15907 | PANTHER:PTHR15907:SF92 | PFAM:PF04749 |
| TIGRFAMs:TIGR01571 | TMHMM:TMhelix | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr5B:+:605336054..605336849
Molecular Weight (calculated)
15220.4 Da
IEP (calculated)
6.987
GRAVY (calculated)
0.064
Length
140 amino acids
Sequence
(BLAST)
(BLAST)
001: MASLNNASWS SGLCGCYDDV GGCCLTFFCP CVVFGRIAEI VDMGATSCCA SGTVYAALAS VTGMGCLYSC GYRSRLREQY RLKETPCGDC CVHWFCEACA
101: LCQEYRELKT RGFDMALGWQ ANMEKMGKTT APQTHAGMTR
101: LCQEYRELKT RGFDMALGWQ ANMEKMGKTT APQTHAGMTR
001: MEKQWTSGLF SCMEDSETAC LTCFCPCVTF GRIADISDEG RTGCGRCGVF YGLICCVVGL PCLFSCTYRT KIRSKFGLPE SPTSDCVTHF FCECCALCQE
101: HRELKTRGLD PSIGWSGNMQ RTMAPPMSQQ MMG
101: HRELKTRGLD PSIGWSGNMQ RTMAPPMSQQ MMG
Arabidopsis Description
PCR7Protein PLANT CADMIUM RESISTANCE 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LS43]
SUBAcon: [extracellular,vacuole,cytosol]
SUBAcon: [extracellular,vacuole,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.