Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- mitochondrion 1
- extracellular 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G365500.1 | Wheat | extracellular | 96.2 | 96.2 |
| TraesCS5D01G507800.1 | Wheat | extracellular | 95.57 | 95.57 |
| TraesCS5B01G507600.1 | Wheat | cytosol, extracellular, plastid | 85.44 | 87.66 |
| TraesCS5B01G507500.1 | Wheat | plastid | 87.34 | 77.53 |
| HORVU5Hr1G115900.1 | Barley | cytosol | 92.41 | 75.26 |
| Zm00001d012900_P001 | Maize | extracellular | 67.72 | 68.15 |
| EER90573 | Sorghum | extracellular | 65.19 | 59.54 |
| TraesCS3B01G548900.1 | Wheat | extracellular | 42.41 | 57.27 |
| TraesCS3B01G549100.1 | Wheat | extracellular | 42.41 | 57.27 |
| Os03t0829900-00 | Rice | extracellular | 44.94 | 52.21 |
| TraesCS1B01G418800.1 | Wheat | cytosol, extracellular, mitochondrion | 60.76 | 51.89 |
| TraesCS5B01G430000.1 | Wheat | cytosol, extracellular, nucleus | 45.57 | 51.43 |
| TraesCS7B01G114500.1 | Wheat | extracellular | 44.3 | 51.09 |
| TraesCS2B01G008000.1 | Wheat | extracellular | 43.67 | 50.74 |
| TraesCS2B01G008100.1 | Wheat | extracellular | 44.94 | 48.97 |
| TraesCS2B01G344100.1 | Wheat | cytosol | 43.04 | 48.23 |
| TraesCS7B01G431900.1 | Wheat | cytosol, nucleus, vacuole | 50.63 | 47.9 |
| TraesCS5B01G009000.1 | Wheat | plastid | 45.57 | 47.06 |
| TraesCS2B01G007900.1 | Wheat | extracellular, vacuole | 42.41 | 46.85 |
| TraesCS6B01G351700.1 | Wheat | plastid | 49.37 | 41.71 |
| TraesCS7B01G066300.1 | Wheat | cytosol, peroxisome, plastid | 36.08 | 30.65 |
| TraesCS7B01G066400.1 | Wheat | cytosol, peroxisome, plastid | 35.44 | 30.11 |
| TraesCS3B01G214000.1 | Wheat | cytosol | 32.91 | 28.26 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G507700.1 | EnsemblPlantsGene:TraesCS5B01G507700 | InterPro:PLAC_motif_containing | PANTHER:PTHR15907 | PANTHER:PTHR15907:SF59 | PFAM:PF04749 |
| SEG:seg | TIGRFAMs:TIGR01571 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr5B:-:673035829..673036412
Molecular Weight (calculated)
16745.1 Da
IEP (calculated)
5.587
GRAVY (calculated)
-0.013
Length
158 amino acids
Sequence
(BLAST)
(BLAST)
001: MKPAAQPVTG VPIGGAPAPA AWSSGLFDCF DDCGLCCLTC WCPCITFGKV AEIVDRGSTS CGTSGALYAL LGSLTGCHWI YSCTYRSKMR AQYALPDDPC
101: CDCCVHFCCE PCGLIQQYKE LKARGYDPDI GWHLNLERGN GGTGAGGVNP PGMQEMGR
101: CDCCVHFCCE PCGLIQQYKE LKARGYDPDI GWHLNLERGN GGTGAGGVNP PGMQEMGR
001: MEAQHLHAKP HAEGEWSTGF CDCFSDCKNC CITFWCPCIT FGQVAEIVDR GSTSCGTAGA LYALIAVVTG CACIYSCFYR GKMRAQYNIK GDDCTDCLKH
101: FCCELCSLTQ QYRELKHRGY DMSLGWAGNV ERQQNQGGVA MGAPVFQGGM TR
101: FCCELCSLTQ QYRELKHRGY DMSLGWAGNV ERQQNQGGVA MGAPVFQGGM TR
Arabidopsis Description
PCR2PCR2 [Source:UniProtKB/TrEMBL;Acc:A0A178WDU8]
SUBAcon: [mitochondrion,plasma membrane,cytosol]
SUBAcon: [mitochondrion,plasma membrane,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.