Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 4
- golgi 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os03t0830400-01 | Rice | extracellular | 51.47 | 47.3 |
| HORVU5Hr1G115870.1 | Barley | extracellular | 51.47 | 46.67 |
| TraesCS5D01G507500.1 | Wheat | cytosol | 52.94 | 46.15 |
| TraesCS4A01G365700.1 | Wheat | cytosol, extracellular, mitochondrion | 52.94 | 45.86 |
| Os03t0830500-01 | Rice | plasma membrane | 47.06 | 45.39 |
| Os03t0830200-00 | Rice | extracellular | 50.0 | 45.33 |
| TraesCS5B01G507700.1 | Wheat | extracellular | 52.21 | 44.94 |
| TraesCS4A01G365600.1 | Wheat | cytosol, extracellular, plastid | 50.74 | 44.52 |
| TraesCS4A01G365500.1 | Wheat | extracellular | 51.47 | 44.3 |
| TraesCS5B01G507600.1 | Wheat | cytosol, extracellular, plastid | 50.0 | 44.16 |
| TraesCS5D01G507700.1 | Wheat | cytosol, extracellular, plastid | 50.0 | 43.87 |
| TraesCS5D01G507800.1 | Wheat | extracellular | 50.74 | 43.67 |
| EER90573 | Sorghum | extracellular | 53.68 | 42.2 |
| Zm00001d012899_P001 | Maize | cytosol, plastid, vacuole | 53.68 | 41.71 |
| TraesCS5D01G507600.1 | Wheat | plastid | 52.94 | 41.14 |
| Os02t0580000-02 | Rice | cytosol | 45.59 | 41.06 |
| Os06t0520733-00 | Rice | extracellular | 33.82 | 40.71 |
| TraesCS5B01G507500.1 | Wheat | plastid | 52.94 | 40.45 |
| Os02t0579800-01 | Rice | cytosol, extracellular, plastid | 47.06 | 39.51 |
| Zm00001d034745_P001 | Maize | cytosol, extracellular, mitochondrion, plastid | 52.21 | 39.44 |
| HORVU5Hr1G115750.1 | Barley | plastid | 52.94 | 38.71 |
| Os04t0461600-01 | Rice | cytosol | 49.26 | 37.43 |
| HORVU5Hr1G115900.1 | Barley | cytosol | 50.74 | 35.57 |
| Os02t0763000-01 | Rice | plasma membrane | 47.06 | 35.36 |
| HORVU5Hr1G115880.1 | Barley | cytosol, mitochondrion, plastid | 50.0 | 31.19 |
| Os10t0112100-01 | Rice | cytosol, plasma membrane, plastid | 38.24 | 27.96 |
| Os01t0267400-01 | Rice | cytosol, extracellular, plastid | 27.94 | 25.85 |
| Os06t0266266-00 | Rice | mitochondrion | 43.38 | 25.32 |
| Os03t0830300-00 | Rice | extracellular | 30.15 | 24.7 |
| Os02t0286933-00 | Rice | cytosol, nucleus, plastid | 7.35 | 9.01 |
Protein Annotations
| EnsemblPlants:Os03t0829900-00 | EnsemblPlantsGene:Os03g0829900 | EntrezGene:107275571 | InterPro:PLAC_motif_containing | PANTHER:PTHR15907 | PANTHER:PTHR15907:SF59 |
| PFAM:PF04749 | ProteinID:AAO39859.1 | ProteinID:AAP46246.1 | ProteinID:ABF99692.1 | ProteinID:BAS87189.1 | ProteinID:EAZ29157.1 |
| RefSeq:XP_015629672.1 | TIGRFAMs:TIGR01571 | TMHMM:TMhelix | UniParc:UPI0000002CDB | UniProt:Q850Y3 | MapMan:35.1 |
Description
FW2.2-like 4Similar to PGPS/D12. (Os03t0829900-00)
Coordinates
chr3:-:34860760..34861520
Molecular Weight (calculated)
15282.6 Da
IEP (calculated)
7.786
GRAVY (calculated)
-0.043
Length
136 amino acids
Sequence
(BLAST)
(BLAST)
001: MARPQHNDWS SGLFACFNDC EVCCLTTVCP CITFGRSAEI VSRGERTCCA AGVMCVLLGF FAHCHCLYSC CYRGKMRDSF HLPEDPCCDC CVHALCLQCA
101: LCQEYRHLKS LGYKPSLGWL GNNQHVPPKH NPPMRR
101: LCQEYRHLKS LGYKPSLGWL GNNQHVPPKH NPPMRR
001: MASQHLQANP HAEGEWSTGF CDCFSDCQNC CITWLCPCIT FGQVADIVDR GNTSCGTAGA LYVLLAAITG CGCLYSCIYR GKIRAQYNIR GDGCTDCLKH
101: FCCELCALTQ EYRELKHRGF DMSLGWAGNV EKQQNQGGVA MGAPAFQGGM SR
101: FCCELCALTQ EYRELKHRGF DMSLGWAGNV EKQQNQGGVA MGAPAFQGGM SR
Arabidopsis Description
PCR3Protein PLANT CADMIUM RESISTANCE 3 [Source:UniProtKB/Swiss-Prot;Acc:P0CW97]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.