Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 3
- golgi 2
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os03t0830400-01 | Rice | extracellular | 82.67 | 83.78 |
| Os03t0830500-01 | Rice | plasma membrane | 76.67 | 81.56 |
| OQU90679 | Sorghum | endoplasmic reticulum, extracellular | 61.33 | 62.16 |
| EER90575 | Sorghum | cytosol, extracellular, mitochondrion | 66.67 | 59.52 |
| Zm00001d012906_P001 | Maize | cytosol, extracellular, mitochondrion | 60.0 | 53.89 |
| Os02t0579800-01 | Rice | cytosol, extracellular, plastid | 58.0 | 53.7 |
| Os02t0580000-02 | Rice | cytosol | 53.33 | 52.98 |
| Os03t0829900-00 | Rice | extracellular | 45.33 | 50.0 |
| Os06t0520733-00 | Rice | extracellular | 36.67 | 48.67 |
| Os02t0763000-01 | Rice | plasma membrane | 52.0 | 43.09 |
| Os04t0461600-01 | Rice | cytosol | 51.33 | 43.02 |
| Os03t0830300-00 | Rice | extracellular | 46.0 | 41.57 |
| Os10t0112100-01 | Rice | cytosol, plasma membrane, plastid | 47.33 | 38.17 |
| Os01t0267400-01 | Rice | cytosol, extracellular, plastid | 33.33 | 34.01 |
| Os06t0266266-00 | Rice | mitochondrion | 48.0 | 30.9 |
| Os02t0286933-00 | Rice | cytosol, nucleus, plastid | 10.67 | 14.41 |
Protein Annotations
| EnsemblPlants:Os03t0830200-00 | EnsemblPlantsGene:Os03g0830200 | EntrezGene:4334660 | InterPro:PLAC_motif_containing | PANTHER:PTHR15907 | PANTHER:PTHR15907:SF59 |
| PFAM:PF04749 | ProteinID:AAO39879.1 | ProteinID:AAP46253.1 | ProteinID:ABF99695.1 | ProteinID:BAF13698.1 | ProteinID:BAS87190.1 |
| ProteinID:EAZ29158.1 | RefSeq:XP_015629237.1 | SEG:seg | TIGRFAMs:TIGR01571 | UniParc:UPI0000002CD8 | UniProt:Q850Y6 |
| MapMan:35.1 | : | : | : | : | : |
Description
FW2.2-like 6Protein of unknown function Cys-rich family protein. (Os03t0830200-00)
Coordinates
chr3:-:34870676..34871354
Molecular Weight (calculated)
15861.1 Da
IEP (calculated)
6.404
GRAVY (calculated)
0.218
Length
150 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKPSAAPVT GVPVGSAAWS TGLCDCFDDC GLCCLTCWCP CITFGRVAEM VDRGSTSCGT GGALYGLLCA FTGCQWIYSC TYRGKMRTQY GLAEAGCADC
101: CVHFCCEPCA LCQEYRELVA RGYDPKLGWH LNADRAAAAG AAPAVQYMGR
101: CVHFCCEPCA LCQEYRELVA RGYDPKLGWH LNADRAAAAG AAPAVQYMGR
001: MEAQHLHAKP HAEGEWSTGF CDCFSDCKNC CITFWCPCIT FGQVAEIVDR GSTSCGTAGA LYALIAVVTG CACIYSCFYR GKMRAQYNIK GDDCTDCLKH
101: FCCELCSLTQ QYRELKHRGY DMSLGWAGNV ERQQNQGGVA MGAPVFQGGM TR
101: FCCELCSLTQ QYRELKHRGY DMSLGWAGNV ERQQNQGGVA MGAPVFQGGM TR
Arabidopsis Description
PCR2PCR2 [Source:UniProtKB/TrEMBL;Acc:A0A178WDU8]
SUBAcon: [mitochondrion,plasma membrane,cytosol]
SUBAcon: [mitochondrion,plasma membrane,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.