Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 4
- plasma membrane 5
- vacuole 4
- golgi 4
- extracellular 5
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d000070_P001 | Maize | cytosol, extracellular, plastid | 53.98 | 42.36 |
| Os03t0830500-01 | Rice | plasma membrane | 46.9 | 37.59 |
| Os03t0830200-00 | Rice | extracellular | 48.67 | 36.67 |
| CDY29143 | Canola | cytosol | 46.9 | 35.33 |
| Os03t0830400-01 | Rice | extracellular | 46.02 | 35.14 |
| AT1G58320.1 | Thale cress | cytosol | 46.02 | 35.14 |
| Solyc12g037950.1.1 | Tomato | extracellular | 46.02 | 34.9 |
| PGSC0003DMT400056038 | Potato | cytosol, extracellular, plastid | 46.02 | 34.9 |
| KRH75408 | Soybean | cytosol | 46.02 | 34.9 |
| Os03t0829900-00 | Rice | extracellular | 40.71 | 33.82 |
| Os02t0580000-02 | Rice | cytosol | 45.13 | 33.77 |
| Os02t0579800-01 | Rice | cytosol, extracellular, plastid | 47.79 | 33.33 |
| PGSC0003DMT400033759 | Potato | cytosol | 40.71 | 31.94 |
| CDY39895 | Canola | cytosol | 46.02 | 31.9 |
| Solyc12g013570.1.1 | Tomato | cytosol | 36.28 | 30.83 |
| Os04t0461600-01 | Rice | cytosol | 47.79 | 30.17 |
| Bra004025.1-P | Field mustard | cytosol, extracellular, plasma membrane | 30.09 | 30.09 |
| Os10t0112100-01 | Rice | cytosol, plasma membrane, plastid | 48.67 | 29.57 |
| KRH39230 | Soybean | extracellular | 39.82 | 29.22 |
| AT1G68630.1 | Thale cress | cytosol | 40.71 | 28.57 |
| VIT_01s0011g03240.t01 | Wine grape | extracellular, plastid | 42.48 | 28.24 |
| CDY04241 | Canola | cytosol | 38.94 | 27.33 |
| CDY07373 | Canola | cytosol | 38.94 | 27.33 |
| Solyc05g009620.2.1 | Tomato | plastid | 23.01 | 26.53 |
| CDX96000 | Canola | plasma membrane | 37.17 | 26.09 |
| CDY38607 | Canola | plasma membrane | 37.17 | 26.09 |
| Bra004328.1-P | Field mustard | plasma membrane | 37.17 | 26.09 |
| CDY38687 | Canola | cytosol | 46.02 | 25.49 |
| Os02t0763000-01 | Rice | plasma membrane | 39.82 | 24.86 |
| Os03t0830300-00 | Rice | extracellular | 36.28 | 24.7 |
| Bra027875.1-P | Field mustard | cytosol | 45.13 | 23.72 |
| Os01t0267400-01 | Rice | cytosol, extracellular, plastid | 27.43 | 21.09 |
| Os06t0266266-00 | Rice | mitochondrion | 40.71 | 19.74 |
| Os02t0286933-00 | Rice | cytosol, nucleus, plastid | 7.08 | 7.21 |
Protein Annotations
| EnsemblPlants:Os06t0520733-00 | EnsemblPlantsGene:Os06g0520733 | InterPro:PLAC_motif_containing | PANTHER:PTHR15907 | PANTHER:PTHR15907:SF92 | PFAM:PF04749 |
| ProteinID:BAS98004.1 | SEG:seg | TIGRFAMs:TIGR01571 | UniParc:UPI000393B663 | UniProt:A0A0P0WXH6 | MapMan:35.1 |
Description
Similar to cell number regulator 4. (Os06t0520733-00)
Coordinates
chr6:-:19157238..19158412
Molecular Weight (calculated)
12497.1 Da
IEP (calculated)
6.829
GRAVY (calculated)
0.090
Length
113 amino acids
Sequence
(BLAST)
(BLAST)
001: TTGLCDCCDD CNSCCLTFFC PCVAFGLIAE TLDRGSISCA IAGITYCWMR PSTVLPGMHT MYSWSYRQKL RATFGMAPEP CADCCLQLFC DRCSLSQMYR
101: ELKNRGVNPA NGN
101: ELKNRGVNPA NGN
001: MEAQHLHAKP HAEGEWSTGF CDCFSDCKNC CITFWCPCIT FGQVAEIVDR GSTSCGTAGA LYALIAVVTG CACIYSCFYR GKMRAQYNIK GDDCTDCLKH
101: FCCELCSLTQ QYRELKHRGY DMSLGNLFLR YTVFFLFHFV NN
101: FCCELCSLTQ QYRELKHRGY DMSLGNLFLR YTVFFLFHFV NN
Arabidopsis Description
PCR2PCR2 [Source:UniProtKB/TrEMBL;Acc:A0A178WDU8]
SUBAcon: [plasma membrane,mitochondrion,cytosol]
SUBAcon: [plasma membrane,mitochondrion,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.