CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY29143	Canola	cytosol	57.84	78.67
CDY39895	Canola	cytosol	62.25	77.91
AT1G58320.1	Thale cress	cytosol	54.41	75.0
Os06t0520733-00	Rice	extracellular	25.49	46.02
CDY24480	Canola	cytosol, extracellular, vacuole	29.9	45.86
CDX92238	Canola	plasma membrane	29.41	45.11
Zm00001d000070_P001	Maize	cytosol, extracellular, plastid	29.41	41.67
Solyc12g037950.1.1	Tomato	extracellular	30.39	41.61
PGSC0003DMT400056038	Potato	cytosol, extracellular, plastid	29.9	40.94
KRH39230	Soybean	extracellular	28.92	38.31
CDY04241	Canola	cytosol	29.9	37.89
CDY07373	Canola	cytosol	29.9	37.89
CDX96000	Canola	plasma membrane	29.9	37.89
CDY38607	Canola	plasma membrane	29.9	37.89
CDX81682	Canola	cytosol, plastid, vacuole	26.96	37.41
CDY45296	Canola	cytosol	26.96	36.42
CDY33732	Canola	cytosol	26.47	35.76
CDY70500	Canola	cytosol	26.96	35.48
CDY71864	Canola	cytosol	25.98	35.1
CDX96001	Canola	cytosol	27.94	34.97
CDX81680	Canola	cytosol	25.49	34.44
CDY33731	Canola	cytosol	25.49	34.44
CDX81681	Canola	cytosol, plasma membrane, plastid	26.96	33.95
CDY33730	Canola	cytosol	25.0	33.77
CDY51779	Canola	endoplasmic reticulum, extracellular	16.18	33.33
CDX92237	Canola	cytosol	26.47	31.21
CDY62851	Canola	cytosol, extracellular, plasma membrane	24.02	31.21
Os10t0112100-01	Rice	cytosol, plasma membrane, plastid	27.94	30.65
CDY48592	Canola	plastid	25.0	29.14
CDY71552	Canola	plastid	25.98	26.24
CDY53672	Canola	cytosol	23.04	25.13
CDY57571	Canola	cytosol	23.53	25.0
CDY62854	Canola	cytosol	26.47	24.77
CDY57415	Canola	cytosol	23.04	24.35
CDY06953	Canola	cytosol	23.04	24.35

Protein Annotations

EnsemblPlants:CDY38687	EnsemblPlantsGene:GSBRNA2T00066441001	InterPro:PLAC_motif_containing	PANTHER:PTHR15907	PANTHER:PTHR15907:SF65	PFAM:PF04749
ProteinID:CDY38687	ProteinID:CDY38687.1	TIGRFAMs:TIGR01571	UniParc:UPI0004EDF0B7	UniProt:A0A078HLD7	MapMan:35.1

Description

BnaC01g28100DBnaC01g28100D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HLD7]

Coordinates

chrLK032430:+:134181..135576

Molecular Weight (calculated)

23547.0 Da

IEP (calculated)

7.586

GRAVY (calculated)

-0.385

Length

204 amino acids

Sequence
(BLAST)

001: MSENVGKDER KVTEGQWTTG LYDCFSEDIS TCYFTWFCPC VAFGRIAEIL DKGETSQGLA GLMLVAMSKV GCGWYYASKY RAKLRNQYSL PEEPCSDGAI
101: HFFCCSCALS QEHRELKYRG LDPSLGNQSF LSSLFSNDAI SEFKRVCRRY DYYKEIELGK VSKNIYMYTP LTKPPSKTVP NQLEYHSSVF NILFWKPYTQ
201: YTYM

Best Arabidopsis Sequence Match ( AT1G58320.1 )
(BLAST)

001: MSEQEGKNEK KVTEGQWTTG LYDCLSEDIS TCCFTWVCPC VAFGRIAEIL DKGETSRGLA GLMVVAMSSI GCGWYYASKY RAKLRHQYAL PEAPCADGAI
101: HCFCCPCALT QEHRELKHRG LDPSLGWNIE NGGLNSNTPP FVASGMDR

Arabidopsis Description

PCR9Protein PLANT CADMIUM RESISTANCE 9 [Source:UniProtKB/Swiss-Prot;Acc:P0CW98]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.