CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
MultiLoc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra004025.1-P	Field mustard	cytosol, extracellular, plasma membrane	70.19	100.0
CDY04241	Canola	cytosol	98.14	98.14
AT1G68630.1	Thale cress	cytosol	89.44	89.44
CDX96000	Canola	plasma membrane	83.23	83.23
CDY38607	Canola	plasma membrane	83.23	83.23
KRH75408	Soybean	cytosol	44.72	48.32
VIT_01s0011g03240.t01	Wine grape	extracellular, plastid	50.93	48.24
PGSC0003DMT400033759	Potato	cytosol	39.13	43.75
Solyc12g013570.1.1	Tomato	cytosol	36.02	43.61
CDY29143	Canola	cytosol	39.75	42.67
Os06t0520733-00	Rice	extracellular	27.33	38.94
Zm00001d000070_P001	Maize	cytosol, extracellular, plastid	34.78	38.89
CDX92238	Canola	plasma membrane	31.68	38.35
CDY24480	Canola	cytosol, extracellular, vacuole	31.06	37.59
CDY51779	Canola	endoplasmic reticulum, extracellular	21.74	35.35
CDY45296	Canola	cytosol	32.92	35.1
CDY71864	Canola	cytosol	32.3	34.44
CDY33732	Canola	cytosol	32.3	34.44
CDY39895	Canola	cytosol	34.78	34.36
CDX81680	Canola	cytosol	31.68	33.77
CDY33731	Canola	cytosol	31.68	33.77
CDX81682	Canola	cytosol, plastid, vacuole	30.43	33.33
CDX96001	Canola	cytosol	32.92	32.52
CDY70500	Canola	cytosol	31.06	32.26
Os10t0112100-01	Rice	cytosol, plasma membrane, plastid	36.65	31.72
CDY62851	Canola	cytosol, extracellular, plasma membrane	30.43	31.21
CDX81681	Canola	cytosol, plasma membrane, plastid	31.06	30.86
CDX92237	Canola	cytosol	32.92	30.64
CDY33730	Canola	cytosol	28.57	30.46
CDY38687	Canola	cytosol	37.89	29.9
CDY48592	Canola	plastid	32.3	29.71
CDY71552	Canola	plastid	31.68	25.25
CDY53672	Canola	cytosol	29.19	25.13
CDY57571	Canola	cytosol	29.19	24.48
CDY57415	Canola	cytosol	29.19	24.35
CDY06953	Canola	cytosol	29.19	24.35
CDY62854	Canola	cytosol	32.3	23.85

Protein Annotations

EnsemblPlants:CDY07373	EnsemblPlantsGene:GSBRNA2T00124346001	GO:A0A078F6U0	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:PLAC_motif_containing	PANTHER:PTHR15907	PANTHER:PTHR15907:SF65	PFAM:PF04749	ProteinID:CDY07373	ProteinID:CDY07373.1
TIGRFAMs:TIGR01571	TMHMM:TMhelix	UniParc:UPI0004EDCD21	UniProt:A0A078F6U0	MapMan:35.1	:

Description

BnaA07g24520DBnaA07g24520D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F6U0]

Coordinates

chrLK031978:-:279814..280562

Molecular Weight (calculated)

18006.7 Da

IEP (calculated)

6.327

GRAVY (calculated)

-0.104

Length

161 amino acids

Sequence
(BLAST)

001: MYGDGPVFKA EGASFRDQPY GRELPQGLWT TGLCDCHLDG HICVQTAIMP CISFAQNTEI VNRGTIPCMD AGLIHLALGF VGCCWLYAFP NRSRLREHFA
101: LPEEPCGDFW VHLFCTSCAI CQESRELKNR GADPSISWLS NVEKWSREKV TPPIVVPGMN R

Best Arabidopsis Sequence Match ( AT1G68630.1 )
(BLAST)

001: MYGNGPVFKA EGTSFRDQPY AEQLPQGLWT TGLCDCHEDA HICVQTAIMP CVSFAQNVEI VNRGTIPCMN AGLIHLALGF IGCSWLYAFP NRSRLREHFA
101: LPEEPCRDFL VHLFCTPCAI CQESRELKNR GADPSIGWLS NVEKWSREKV TPPIVVPGMI R

Arabidopsis Description

PCR12Protein PLANT CADMIUM RESISTANCE 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX26]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.