Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX81680 | Canola | cytosol | 98.01 | 98.01 |
| CDY71864 | Canola | cytosol | 92.05 | 92.05 |
| CDY33732 | Canola | cytosol | 92.05 | 92.05 |
| CDY45296 | Canola | cytosol | 88.08 | 88.08 |
| AT1G14870.1 | Thale cress | cytosol, mitochondrion, plasma membrane | 86.75 | 86.18 |
| CDY51779 | Canola | endoplasmic reticulum, extracellular | 54.3 | 82.83 |
| AT5G35525.1 | Thale cress | cytosol | 76.16 | 75.66 |
| AT1G14880.1 | Thale cress | cytosol | 74.83 | 74.83 |
| CDX81682 | Canola | cytosol, plastid, vacuole | 67.55 | 69.39 |
| CDY33730 | Canola | cytosol | 64.9 | 64.9 |
| CDX81681 | Canola | cytosol, plasma membrane, plastid | 64.9 | 60.49 |
| Bra026795.1-P | Field mustard | extracellular | 86.09 | 60.47 |
| KRH47639 | Soybean | endoplasmic reticulum, extracellular | 36.42 | 59.78 |
| KRH41677 | Soybean | extracellular | 57.62 | 49.71 |
| Solyc04g007900.2.1 | Tomato | nucleus | 60.93 | 49.46 |
| KRH60380 | Soybean | plastid | 60.26 | 48.92 |
| PGSC0003DMT400075916 | Potato | cytosol, endoplasmic reticulum, nucleus | 60.26 | 47.89 |
| KRH60379 | Soybean | cytosol, plastid, vacuole | 58.94 | 46.6 |
| CDX92238 | Canola | plasma membrane | 38.41 | 43.61 |
| CDY24480 | Canola | cytosol, extracellular, vacuole | 38.41 | 43.61 |
| CDX96001 | Canola | cytosol | 46.36 | 42.94 |
| CDY62851 | Canola | cytosol, extracellular, plasma membrane | 41.72 | 40.13 |
| VIT_01s0011g05450.t01 | Wine grape | mitochondrion | 57.62 | 39.01 |
| CDY29143 | Canola | cytosol | 38.41 | 38.67 |
| CDX92237 | Canola | cytosol | 43.71 | 38.15 |
| CDY48592 | Canola | plastid | 43.05 | 37.14 |
| CDY70500 | Canola | cytosol | 37.75 | 36.77 |
| CDY71552 | Canola | plastid | 44.37 | 33.17 |
| CDY39895 | Canola | cytosol | 35.1 | 32.52 |
| CDY04241 | Canola | cytosol | 33.77 | 31.68 |
| CDY07373 | Canola | cytosol | 33.77 | 31.68 |
| CDY62854 | Canola | cytosol | 44.37 | 30.73 |
| CDX96000 | Canola | plasma membrane | 31.79 | 29.81 |
| CDY38607 | Canola | plasma membrane | 31.79 | 29.81 |
| CDY53672 | Canola | cytosol | 33.77 | 27.27 |
| CDY57571 | Canola | cytosol | 34.44 | 27.08 |
| CDY06953 | Canola | cytosol | 33.77 | 26.42 |
| CDY57415 | Canola | cytosol | 33.77 | 26.42 |
| CDY38687 | Canola | cytosol | 34.44 | 25.49 |
| Os02t0286933-00 | Rice | cytosol, nucleus, plastid | 6.62 | 9.01 |
Protein Annotations
| EnsemblPlants:CDY33731 | EnsemblPlantsGene:GSBRNA2T00055141001 | GO:A0A078H796 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:PLAC_motif_containing | PANTHER:PTHR15907 | PANTHER:PTHR15907:SF92 | PFAM:PF04749 | ProteinID:CDY33731 | ProteinID:CDY33731.1 |
| TIGRFAMs:TIGR01571 | TMHMM:TMhelix | UniParc:UPI0004EC02E0 | UniProt:A0A078H796 | MapMan:35.1 | : |
Description
BnaA09g45370DBnaA09g45370D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H796]
Coordinates
chrLK032321:+:45018..46071
Molecular Weight (calculated)
16549.7 Da
IEP (calculated)
5.610
GRAVY (calculated)
-0.178
Length
151 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAEHLHGKP QAEGEWSTGF CDCFSDCKNC CITCWCPCIT FGQVAEIVDQ GSTTCGTAGA LYALINAVTG CACIYSCFYR GKMRAQYNIE GSDCGDCLKH
101: FFCELCALTQ QYRELKNRGF NMDLGWAGNV QRQQNQGAAM GAPVFQGGMN R
101: FFCELCALTQ QYRELKNRGF NMDLGWAGNV QRQQNQGAAM GAPVFQGGMN R
001: MEAQHLHAKP HAEGEWSTGF CDCFSDCKNC CITFWCPCIT FGQVAEIVDR GSTSCGTAGA LYALIAVVTG CACIYSCFYR GKMRAQYNIK GDDCTDCLKH
101: FCCELCSLTQ QYRELKHRGY DMSLGWAGNV ERQQNQGGVA MGAPVFQGGM TR
101: FCCELCSLTQ QYRELKHRGY DMSLGWAGNV ERQQNQGGVA MGAPVFQGGM TR
Arabidopsis Description
PCR2PCR2 [Source:UniProtKB/TrEMBL;Acc:A0A178WDU8]
SUBAcon: [mitochondrion,plasma membrane,cytosol]
SUBAcon: [mitochondrion,plasma membrane,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.