Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 5
- golgi 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY24480 | Canola | cytosol, extracellular, vacuole | 99.25 | 99.25 |
| AT3G18470.1 | Thale cress | cytosol, extracellular, vacuole | 77.44 | 77.44 |
| Bra022323.1-P | Field mustard | cytosol, extracellular, plasma membrane | 88.72 | 73.29 |
| CDY62851 | Canola | cytosol, extracellular, plasma membrane | 57.14 | 48.41 |
| CDY48592 | Canola | plastid | 60.9 | 46.29 |
| CDY29143 | Canola | cytosol | 47.37 | 42.0 |
| CDY71552 | Canola | plastid | 62.41 | 41.09 |
| CDY51779 | Canola | endoplasmic reticulum, extracellular | 29.32 | 39.39 |
| CDY70500 | Canola | cytosol | 45.86 | 39.35 |
| CDX96001 | Canola | cytosol | 48.12 | 39.26 |
| CDX81680 | Canola | cytosol | 43.61 | 38.41 |
| CDY33731 | Canola | cytosol | 43.61 | 38.41 |
| CDX92237 | Canola | cytosol | 49.62 | 38.15 |
| CDY62854 | Canola | cytosol | 62.41 | 38.07 |
| CDY33732 | Canola | cytosol | 42.86 | 37.75 |
| CDY45296 | Canola | cytosol | 42.11 | 37.09 |
| CDY71864 | Canola | cytosol | 42.11 | 37.09 |
| CDY39895 | Canola | cytosol | 45.11 | 36.81 |
| CDX81682 | Canola | cytosol, plastid, vacuole | 39.85 | 36.05 |
| CDY33730 | Canola | cytosol | 39.85 | 35.1 |
| CDX81681 | Canola | cytosol, plasma membrane, plastid | 41.35 | 33.95 |
| CDY38607 | Canola | plasma membrane | 38.35 | 31.68 |
| CDY07373 | Canola | cytosol | 38.35 | 31.68 |
| CDY04241 | Canola | cytosol | 38.35 | 31.68 |
| CDX96000 | Canola | plasma membrane | 38.35 | 31.68 |
| CDY38687 | Canola | cytosol | 45.11 | 29.41 |
| CDY06953 | Canola | cytosol | 34.59 | 23.83 |
| CDY57571 | Canola | cytosol | 33.83 | 23.44 |
| CDY57415 | Canola | cytosol | 33.83 | 23.32 |
| CDY53672 | Canola | cytosol | 31.58 | 22.46 |
Protein Annotations
| EnsemblPlants:CDX92238 | EnsemblPlantsGene:GSBRNA2T00153952001 | GO:A0A078DY91 | InterPro:PLAC_motif_containing | PANTHER:PTHR15907 | PANTHER:PTHR15907:SF49 |
| PFAM:PF04749 | ProteinID:CDX92238 | ProteinID:CDX92238.1 | TIGRFAMs:TIGR01571 | TMHMM:TMhelix | UniParc:UPI0004EEE1C8 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaA05g21690D
Coordinates
chrLK031871:-:995946..996991
Molecular Weight (calculated)
14745.9 Da
IEP (calculated)
6.662
GRAVY (calculated)
-0.044
Length
133 amino acids
Sequence
(BLAST)
(BLAST)
001: MENQWTSGLC SCMEDGKIVC LTCFCPCVAF GRIANIADEG NHGCGECGIF YGLICCVVGL PCLFSCTYRT KIRRKFGLPE SPASDCITHC FCESCALCQE
101: YRELKNRGLD PSIGWNEHMQ RATSPPMGQY MKS
101: YRELKNRGLD PSIGWNEHMQ RATSPPMGQY MKS
001: MEKQWTSGLF SCMEDSETAC LTCFCPCVTF GRIADISDEG RTGCGRCGVF YGLICCVVGL PCLFSCTYRT KIRSKFGLPE SPTSDCVTHF FCECCALCQE
101: HRELKTRGLD PSIGWSGNMQ RTMAPPMSQQ MMG
101: HRELKTRGLD PSIGWSGNMQ RTMAPPMSQQ MMG
Arabidopsis Description
PCR7Protein PLANT CADMIUM RESISTANCE 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LS43]
SUBAcon: [extracellular,vacuole,cytosol]
SUBAcon: [extracellular,vacuole,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.