CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY29143	Canola	cytosol	74.85	81.33
AT1G58320.1	Thale cress	cytosol	65.64	72.3
Bra027875.1-P	Field mustard	cytosol	84.05	63.72
CDY38687	Canola	cytosol	77.91	62.25
Os06t0520733-00	Rice	extracellular	31.9	46.02
CDY24480	Canola	cytosol, extracellular, vacuole	37.42	45.86
CDX92238	Canola	plasma membrane	36.81	45.11
Solyc12g037950.1.1	Tomato	extracellular	38.04	41.61
Zm00001d000070_P001	Maize	cytosol, extracellular, plastid	35.58	40.28
PGSC0003DMT400056038	Potato	cytosol, extracellular, plastid	36.81	40.27
CDY45296	Canola	cytosol	34.36	37.09
CDY33732	Canola	cytosol	33.74	36.42
CDX96000	Canola	plasma membrane	35.58	36.02
CDY38607	Canola	plasma membrane	35.58	36.02
CDY71864	Canola	cytosol	33.13	35.76
CDX81682	Canola	cytosol, plastid, vacuole	31.9	35.37
CDY33731	Canola	cytosol	32.52	35.1
CDX81680	Canola	cytosol	32.52	35.1
KRH39230	Soybean	extracellular	33.13	35.06
CDY07373	Canola	cytosol	34.36	34.78
CDY04241	Canola	cytosol	34.36	34.78
CDX96001	Canola	cytosol	33.74	33.74
CDY70500	Canola	cytosol	31.9	33.55
CDX81681	Canola	cytosol, plasma membrane, plastid	33.13	33.33
CDY51779	Canola	endoplasmic reticulum, extracellular	20.25	33.33
CDY62851	Canola	cytosol, extracellular, plasma membrane	29.45	30.57
CDY33730	Canola	cytosol	28.22	30.46
CDX92237	Canola	cytosol	30.67	28.9
CDY48592	Canola	plastid	30.67	28.57
Os10t0112100-01	Rice	cytosol, plasma membrane, plastid	31.9	27.96
CDY71552	Canola	plastid	31.9	25.74
CDY62854	Canola	cytosol	32.52	24.31
CDY57571	Canola	cytosol	28.22	23.96
CDY53672	Canola	cytosol	26.99	23.53
CDY57415	Canola	cytosol	27.61	23.32
CDY06953	Canola	cytosol	27.61	23.32

Protein Annotations

EnsemblPlants:CDY39895	EnsemblPlantsGene:GSBRNA2T00068746001	GO:A0A078HMZ2	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:PLAC_motif_containing	PANTHER:PTHR15907	PANTHER:PTHR15907:SF65	PFAM:PF04749	ProteinID:CDY39895	ProteinID:CDY39895.1
TIGRFAMs:TIGR01571	TMHMM:TMhelix	UniParc:UPI0004EE044C	UniProt:A0A078HMZ2	MapMan:35.1	:

Description

BnaA09g14770DBnaA09g14770D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HMZ2]

Coordinates

chrLK032460:+:25495..26636

Molecular Weight (calculated)

18549.0 Da

IEP (calculated)

6.634

GRAVY (calculated)

-0.297

Length

163 amino acids

Sequence
(BLAST)

001: MSEHEGKYAM KVTEGQWTTG LYDCFSEDIP TCCFTWFCPC VAFGRIAEIL DKGETGQGFA GLMVVAMSHI GCGWYYASTY RAKLRRQYSL PEEPCSDGAI
101: HFFCCSCALS QEHRELKYRG LDPSLGNQSL FSPLFSNDAI FKFKGTSNHR DCIYFQKNEK YNI

Best Arabidopsis Sequence Match ( AT1G58320.1 )
(BLAST)

001: MSEQEGKNEK KVTEGQWTTG LYDCLSEDIS TCCFTWVCPC VAFGRIAEIL DKGETSRGLA GLMVVAMSSI GCGWYYASKY RAKLRHQYAL PEAPCADGAI
101: HCFCCPCALT QEHRELKHRG LDPSLGWNIE NGGLNSNTPP FVASGMDR

Arabidopsis Description

PCR9Protein PLANT CADMIUM RESISTANCE 9 [Source:UniProtKB/Swiss-Prot;Acc:P0CW98]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.