Factsheet for Zm00001d000070_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, extracellular, cytosol

Predictor Summary:

plastid 2
cytosol 1
extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular, plastid
Any Predictor:	cytosol, plastid, secretory
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os06t0520733-00	Rice	extracellular	42.36	53.98
Solyc12g037950.1.1	Tomato	extracellular	47.92	46.31
PGSC0003DMT400056038	Potato	cytosol, extracellular, plastid	47.92	46.31
Zm00001d012900_P001	Maize	extracellular	47.22	43.31
Zm00001d015276_P001	Maize	cytosol, endoplasmic reticulum, nucleus	40.97	42.75
CDY29143	Canola	cytosol	43.75	42.0
Solyc05g009620.2.1	Tomato	plastid	28.47	41.84
Zm00001d012899_P001	Maize	cytosol, plastid, vacuole	50.69	41.71
PGSC0003DMT400033759	Potato	cytosol	40.97	40.97
Os10t0112100-01	Rice	cytosol, plasma membrane, plastid	52.78	40.86
Bra004025.1-P	Field mustard	cytosol, extracellular, plasma membrane	31.94	40.71
AT1G58320.1	Thale cress	cytosol	41.67	40.54
Zm00001d034745_P001	Maize	cytosol, extracellular, mitochondrion, plastid	50.0	40.0
KRH39230	Soybean	extracellular	42.36	39.61
Zm00001d012906_P001	Maize	cytosol, extracellular, mitochondrion	45.14	38.92
Solyc12g013570.1.1	Tomato	cytosol	35.42	38.35
Zm00001d050899_P001	Maize	cytosol, extracellular, mitochondrion	47.22	37.57
KRH75408	Soybean	cytosol	38.19	36.91
VIT_01s0011g03240.t01	Wine grape	extracellular, plastid	43.06	36.47
CDY39895	Canola	cytosol	40.28	35.58
AT1G68630.1	Thale cress	cytosol	38.89	34.78
CDY07373	Canola	cytosol	38.89	34.78
CDY04241	Canola	cytosol	38.89	34.78
CDY38607	Canola	plasma membrane	38.19	34.16
CDX96000	Canola	plasma membrane	38.19	34.16
Bra004328.1-P	Field mustard	plasma membrane	38.19	34.16
Zm00001d052171_P001	Maize	cytosol, mitochondrion, plastid	42.36	32.28
CDY38687	Canola	cytosol	41.67	29.41
Zm00001d008282_P003	Maize	cytosol, extracellular, plasma membrane	34.72	27.17
Bra027875.1-P	Field mustard	cytosol	39.58	26.51

Protein Annotations

EnsemblPlants:Zm00001d000070_P001	EnsemblPlants:Zm00001d000070_T001	EnsemblPlantsGene:Zm00001d000070	EntrezGene:100500711	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:PLAC_motif_containing	PANTHER:PTHR15907	PANTHER:PTHR15907:SF94	PFAM:PF04749	SEG:seg
TIGRFAMs:TIGR01571	TMHMM:TMhelix	UniParc:UPI000182F0D5	UniProt:A0A1X7YED2	MapMan:35.1	:

Description

Protein PLANT CADMIUM RESISTANCE 12

Coordinates

chrB73V4_ctg10:+:839040..842527

Molecular Weight (calculated)

15762.5 Da

IEP (calculated)

7.404

GRAVY (calculated)

0.176

Length

144 amino acids

Sequence
(BLAST)

001: MSTYPPPTGE WTTGLCGCFS DCKSCCLSFL CPCIPFGQVA EVLDKGMTSC GLAGLLYCLL LHAGVAVVPC HCIYTCTYRR KLRAAYDLPP EPCADCCVHM
101: WCGPCAISQM YRELKNRGAD PAMGWEVLSK KTTMAPVPMQ DMTR

Best Arabidopsis Sequence Match ( AT1G14870.2 )
(BLAST)

001: MEAQHLHAKP HAEGEWSTGF CDCFSDCKNC CITFWCPCIT FGQVAEIVDR GSTSCGTAGA LYALIAVVTG CACIYSCFYR GKMRAQYNIK GDDCTDCLKH
101: FCCELCSLTQ QYRELKHRGY DMSLGNLFLR YTVFFLFHFV NN

Arabidopsis Description

PCR2PCR2 [Source:UniProtKB/TrEMBL;Acc:A0A178WDU8]
SUBAcon: [mitochondrion,plasma membrane,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.