Factsheet for Bra004328.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 4
golgi 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY38607	Canola	plasma membrane	100.0	100.0
CDX96000	Canola	plasma membrane	100.0	100.0
Bra004025.1-P	Field mustard	cytosol, extracellular, plasma membrane	59.01	84.07
AT1G68630.1	Thale cress	cytosol	81.99	81.99
VIT_01s0011g03240.t01	Wine grape	extracellular, plastid	50.93	48.24
KRH75408	Soybean	cytosol	42.86	46.31
PGSC0003DMT400033759	Potato	cytosol	40.99	45.83
Solyc12g013570.1.1	Tomato	cytosol	34.78	42.11
Zm00001d000070_P001	Maize	cytosol, extracellular, plastid	34.16	38.19
Os06t0520733-00	Rice	extracellular	26.09	37.17
Bra026794.1-P	Field mustard	cytosol, plastid, vacuole	31.68	34.69
Bra004325.1-P	Field mustard	cytosol	34.16	33.74
Bra026181.1-P	Field mustard	cytosol	31.06	33.11
Bra026796.1-P	Field mustard	cytosol	30.43	32.45
Os10t0112100-01	Rice	cytosol, plasma membrane, plastid	37.27	32.26
Bra022323.1-P	Field mustard	cytosol, extracellular, plasma membrane	30.43	30.43
Bra022322.1-P	Field mustard	cytosol	31.06	28.9
Bra027875.1-P	Field mustard	cytosol	37.89	28.37
Bra018953.1-P	Field mustard	plastid	32.3	27.66
Bra016960.1-P	Field mustard	cytosol	27.33	22.8
Bra018774.1-P	Field mustard	cytosol	31.06	22.12
Bra026795.1-P	Field mustard	extracellular	28.57	21.4

Protein Annotations

EnsemblPlants:Bra004328.1	EnsemblPlants:Bra004328.1-P	EnsemblPlantsGene:Bra004328	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:PLAC_motif_containing	PANTHER:PTHR15907	PANTHER:PTHR15907:SF65	PFAM:PF04749	TIGRFAMs:TIGR01571	TMHMM:TMhelix
UniParc:UPI00025417B2	UniProt:M4CJE4	MapMan:35.1	:	:	:

Description

AT1G68630 (E=3e-081) | unknown protein

Coordinates

chrA07:+:18011731..18012509

Molecular Weight (calculated)

18024.8 Da

IEP (calculated)

5.600

GRAVY (calculated)

-0.023

Length

161 amino acids

Sequence
(BLAST)

001: MYGDVPVFMA EGELFRDQPY AGELPQGLWT TGLCDCHEDG CICFQTAIVP CVSFAQNTEI VNRGTIPCIN AGLIHLALGF VGCCWLYAFP SRSRLREHFA
101: LPEKPCSDYW VHICCTPCAI CQESRELKNQ GADPSLGWVS NIEKWRREKI TPPIVVPGMN R

Best Arabidopsis Sequence Match ( AT1G68630.1 )
(BLAST)

001: MYGNGPVFKA EGTSFRDQPY AEQLPQGLWT TGLCDCHEDA HICVQTAIMP CVSFAQNVEI VNRGTIPCMN AGLIHLALGF IGCSWLYAFP NRSRLREHFA
101: LPEEPCRDFL VHLFCTPCAI CQESRELKNR GADPSIGWLS NVEKWSREKV TPPIVVPGMI R

Arabidopsis Description

PCR12Protein PLANT CADMIUM RESISTANCE 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX26]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.