Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX92237 | Canola | cytosol | 98.84 | 98.84 |
| AT3G18460.1 | Thale cress | cytosol, extracellular, nucleus, plastid | 75.14 | 70.65 |
| AT3G18450.1 | Thale cress | plastid | 71.68 | 67.39 |
| Bra018774.1-P | Field mustard | cytosol | 61.27 | 46.9 |
| Bra026181.1-P | Field mustard | cytosol | 38.15 | 43.71 |
| Bra026796.1-P | Field mustard | cytosol | 36.99 | 42.38 |
| Bra004325.1-P | Field mustard | cytosol | 35.26 | 37.42 |
| Bra026794.1-P | Field mustard | cytosol, plastid, vacuole | 31.79 | 37.41 |
| Bra022323.1-P | Field mustard | cytosol, extracellular, plasma membrane | 34.68 | 37.27 |
| Bra004025.1-P | Field mustard | cytosol, extracellular, plasma membrane | 24.28 | 37.17 |
| Bra018953.1-P | Field mustard | plastid | 38.15 | 35.11 |
| Bra004328.1-P | Field mustard | plasma membrane | 28.9 | 31.06 |
| Bra026795.1-P | Field mustard | extracellular | 34.1 | 27.44 |
| VIT_17s0000g03960.t01 | Wine grape | cytosol, nucleus, plastid | 46.24 | 25.56 |
| VIT_14s0006g03190.t01 | Wine grape | cytosol, nucleus, plastid | 45.66 | 25.08 |
| Bra027875.1-P | Field mustard | cytosol | 28.9 | 23.26 |
| Bra016960.1-P | Field mustard | cytosol | 25.43 | 22.8 |
| Solyc03g119660.1.1 | Tomato | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 49.13 | 20.53 |
| PGSC0003DMT400014354 | Potato | cytosol, endoplasmic reticulum, nucleus | 47.98 | 19.39 |
Protein Annotations
| EnsemblPlants:Bra022322.1 | EnsemblPlants:Bra022322.1-P | EnsemblPlantsGene:Bra022322 | InterPro:PLAC_motif_containing | PANTHER:PTHR15907 | PANTHER:PTHR15907:SF49 |
| PFAM:PF04749 | TIGRFAMs:TIGR01571 | TMHMM:TMhelix | UniParc:UPI000254815D | UniProt:M4E0M5 | MapMan:35.1 |
Description
AT3G18460 (E=1e-069) | unknown protein
Coordinates
chrA05:+:18418945..18419888
Molecular Weight (calculated)
19180.9 Da
IEP (calculated)
5.135
GRAVY (calculated)
-0.286
Length
173 amino acids
Sequence
(BLAST)
(BLAST)
001: MVRPGLDQPN QAHPQGDGNN KAHIQPNIPT GIPVDNQTQN RWNSDIFDCM NDSENAVITF IVPCVTFGQI AEIVDEGATT CAIGGVLYGA IFLTLFPSVY
101: SSLFRAKIRN KYGLPDAPAP DWLTHLFCEP CALCQEYREL KHRGFDPKIG WAMNVQAQQQ EMMAPPTGQR MMG
101: SSLFRAKIRN KYGLPDAPAP DWLTHLFCEP CALCQEYREL KHRGFDPKIG WAMNVQAQQQ EMMAPPTGQR MMG
001: MGRPGSQPNE AQPPPVQVQP TVNRDNQVHS QNGAIGQANI QTGRPVNNQT QNLWSSDLFD CMNDSENAVI TCLAPCVTLG QIAEIVDEGA TPCATGGLLY
101: GMIFFIGVPF VYSCMFRAKM RNKYGLPDAP APDWITHLFC EHCALCQEYR ELKHRGFDPN IGWAGNVQAQ QPVMSPPTGQ RMMG
101: GMIFFIGVPF VYSCMFRAKM RNKYGLPDAP APDWITHLFC EHCALCQEYR ELKHRGFDPN IGWAGNVQAQ QPVMSPPTGQ RMMG
Arabidopsis Description
PCR4Protein PLANT CADMIUM RESISTANCE 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LS44]
SUBAcon: [plastid,extracellular,nucleus,cytosol]
SUBAcon: [plastid,extracellular,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.