Factsheet for Bra026794.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, vacuole, cytosol

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 3
plasma membrane 3
golgi 3
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid, vacuole
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
EpiLoc:	golgi
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX81682	Canola	cytosol, plastid, vacuole	97.96	97.96
Bra026796.1-P	Field mustard	cytosol	70.75	68.87
Bra026181.1-P	Field mustard	cytosol	70.07	68.21
KRH47639	Soybean	endoplasmic reticulum, extracellular	36.73	58.7
KRH41677	Soybean	extracellular	57.14	48.0
KRH60380	Soybean	plastid	59.18	46.77
Bra004325.1-P	Field mustard	cytosol	51.02	46.01
KRH60379	Soybean	cytosol, plastid, vacuole	59.18	45.55
Solyc04g007900.2.1	Tomato	nucleus	53.06	41.94
Bra026795.1-P	Field mustard	extracellular	60.54	41.4
PGSC0003DMT400075916	Potato	cytosol, endoplasmic reticulum, nucleus	52.38	40.53
VIT_01s0011g05450.t01	Wine grape	mitochondrion	53.74	35.43
Bra004025.1-P	Field mustard	cytosol, extracellular, plasma membrane	27.21	35.4
Bra022323.1-P	Field mustard	cytosol, extracellular, plasma membrane	36.05	32.92
Bra022322.1-P	Field mustard	cytosol	37.41	31.79
Bra004328.1-P	Field mustard	plasma membrane	34.69	31.68
Bra018953.1-P	Field mustard	plastid	35.37	27.66
Bra018774.1-P	Field mustard	cytosol	39.46	25.66
Bra027875.1-P	Field mustard	cytosol	36.05	24.65
Bra016960.1-P	Field mustard	cytosol	29.25	22.28
Os02t0286933-00	Rice	cytosol, nucleus, plastid	6.12	8.11

Protein Annotations

EnsemblPlants:Bra026794.1	EnsemblPlants:Bra026794.1-P	EnsemblPlantsGene:Bra026794	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:PLAC_motif_containing	ncoils:Coil	PANTHER:PTHR15907	PANTHER:PTHR15907:SF92	PFAM:PF04749	SEG:seg
TIGRFAMs:TIGR01571	TMHMM:TMhelix	UniParc:UPI0002542D2B	UniProt:M4EDD4	MapMan:35.1	:

Description

AT1G14870 (E=2e-047) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: plasma membrane; EXPRESSED IN: callus; CONTAINS InterPro DOMAIN/s: EGF-type aspartate/asparagine hydroxylation conserved site (InterPro:IPR000152), Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G35525.1); Has 492 Blast hits to 491 proteins in 78 species: Archae - 0; Bacteria - 0; Metazoa - 93; Fungi - 76; Plants - 297; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink).

Coordinates

chrA09:+:33722806..33723693

Molecular Weight (calculated)

16085.4 Da

IEP (calculated)

7.631

GRAVY (calculated)

-0.030

Length

147 amino acids

Sequence
(BLAST)

001: MEVQGKPQAE GEWSTGFCDS CSDCSICCLT CWCPCVTVGR IVEIVDKGST SCCAAGALYM LLTWFTGCGF IYSCHYRTKM RKQYNLKGSE CGDCFKHFCC
101: ERCALTQAYR ELTNRGFDVA LGWQGNAGRQ NAGVAMGAPV VQGGMMR

Best Arabidopsis Sequence Match ( AT1G14870.1 )
(BLAST)

001: MEAQHLHAKP HAEGEWSTGF CDCFSDCKNC CITFWCPCIT FGQVAEIVDR GSTSCGTAGA LYALIAVVTG CACIYSCFYR GKMRAQYNIK GDDCTDCLKH
101: FCCELCSLTQ QYRELKHRGY DMSLGWAGNV ERQQNQGGVA MGAPVFQGGM TR

Arabidopsis Description

PCR2PCR2 [Source:UniProtKB/TrEMBL;Acc:A0A178WDU8]
SUBAcon: [mitochondrion,plasma membrane,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.