Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- golgi 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| extracellular:
25724908
|
msms PMID:
25724908
doi
From the ‡University of Sydney, School of Biological Sciences, Sydney Australia;, From the ‡University of Sydney, School of Biological Sciences, Sydney Australia; penny.smith@sydney.edu.au., From the ‡University of Sydney, School of Biological Sciences, Sydney Australia; §Flinders University, School of Biological Sciences, Adelaide Australia.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH47639 | Soybean | endoplasmic reticulum, extracellular | 44.57 | 84.78 |
| KRH60380 | Soybean | plastid | 80.57 | 75.81 |
| KRH60379 | Soybean | cytosol, plastid, vacuole | 69.14 | 63.35 |
| AT5G35525.1 | Thale cress | cytosol | 53.14 | 61.18 |
| AT1G14870.1 | Thale cress | cytosol, mitochondrion, plasma membrane | 53.14 | 61.18 |
| Bra026181.1-P | Field mustard | cytosol | 52.0 | 60.26 |
| Bra026796.1-P | Field mustard | cytosol | 52.0 | 60.26 |
| CDY45296 | Canola | cytosol | 52.0 | 60.26 |
| AT1G14880.1 | Thale cress | cytosol | 51.43 | 59.6 |
| CDY71864 | Canola | cytosol | 51.43 | 59.6 |
| CDY33732 | Canola | cytosol | 51.43 | 59.6 |
| CDY33731 | Canola | cytosol | 49.71 | 57.62 |
| Bra026794.1-P | Field mustard | cytosol, plastid, vacuole | 48.0 | 57.14 |
| CDX81680 | Canola | cytosol | 49.14 | 56.95 |
| CDX81682 | Canola | cytosol, plastid, vacuole | 47.43 | 56.46 |
| CDY51779 | Canola | endoplasmic reticulum, extracellular | 30.86 | 54.55 |
| CDY33730 | Canola | cytosol | 46.29 | 53.64 |
| VIT_01s0011g05470.t01 | Wine grape | cytosol, plastid | 57.71 | 50.25 |
| PGSC0003DMT400075916 | Potato | cytosol, endoplasmic reticulum, nucleus | 53.71 | 49.47 |
| CDX81681 | Canola | cytosol, plasma membrane, plastid | 45.71 | 49.38 |
| Solyc04g007900.2.1 | Tomato | nucleus | 52.0 | 48.92 |
| KRH34433 | Soybean | extracellular, nucleus, vacuole | 37.14 | 47.79 |
| KRH75408 | Soybean | cytosol | 38.29 | 44.97 |
| KRH49878 | Soybean | endoplasmic reticulum | 40.57 | 44.65 |
| KRH50266 | Soybean | cytosol, peroxisome, plastid | 45.71 | 41.45 |
| KRH39230 | Soybean | extracellular | 36.0 | 40.91 |
| KRH71150 | Soybean | cytosol | 44.57 | 40.0 |
| KRH71889 | Soybean | cytosol | 38.29 | 37.43 |
| Bra026795.1-P | Field mustard | extracellular | 45.71 | 37.21 |
| KRH09890 | Soybean | cytosol | 33.14 | 34.52 |
| KRH77728 | Soybean | extracellular | 30.86 | 29.19 |
| KRH27778 | Soybean | extracellular, nucleus, plasma membrane | 29.71 | 27.66 |
| Os02t0286933-00 | Rice | cytosol, nucleus, plastid | 8.57 | 13.51 |
Protein Annotations
| EMBL:ACUP02004777 | EnsemblPlants:KRH41677 | EnsemblPlantsGene:GLYMA_08G043500 | InterPro:PLAC_motif_containing | PANTHER:PTHR15907 | PANTHER:PTHR15907:SF92 |
| PFAM:PF04749 | ProteinID:KRH41677 | ProteinID:KRH41677.1 | SEG:seg | TIGRFAMs:TIGR01571 | UniParc:UPI00023C6625 |
| UniProt:I1KQ86 | MapMan:35.1 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr8:-:3425579..3426758
Molecular Weight (calculated)
19064.7 Da
IEP (calculated)
6.415
GRAVY (calculated)
-0.163
Length
175 amino acids
Sequence
(BLAST)
(BLAST)
001: MLEQQGSDPT KPAAAATGFP ATTEASSYAP VAPPQSKPTV DWSTGLCDCF SDCGNCCITW WCPCVTFGRV AEIVDRGSTS CGASGALYTL VCCGWPYSCF
101: YRSKMRRQYG LKGNCCTDCL LHCCCESCAL CQEYRELKQR GFDMIIGWHG NVEQRIQEVA MTAATPPSVE KGMSR
101: YRSKMRRQYG LKGNCCTDCL LHCCCESCAL CQEYRELKQR GFDMIIGWHG NVEQRIQEVA MTAATPPSVE KGMSR
001: MEAQHLHAKP HAEGEWSTGF CDCFSDCKNC CITFWCPCIT FGQVAEIVDR GSTSCGTAGA LYALIAVVTG CACIYSCFYR GKMRAQYNIK GDDCTDCLKH
101: FCCELCSLTQ QYRELKHRGY DMSLGWAGNV ERQQNQGGVA MGAPVFQGGM TR
101: FCCELCSLTQ QYRELKHRGY DMSLGWAGNV ERQQNQGGVA MGAPVFQGGM TR
Arabidopsis Description
PCR2PCR2 [Source:UniProtKB/TrEMBL;Acc:A0A178WDU8]
SUBAcon: [mitochondrion,plasma membrane,cytosol]
SUBAcon: [mitochondrion,plasma membrane,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.