Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plasma membrane, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra026796.1-P | Field mustard | cytosol | 86.84 | 87.42 |
| CDY71864 | Canola | cytosol | 86.18 | 86.75 |
| CDY33732 | Canola | cytosol | 86.18 | 86.75 |
| CDY33731 | Canola | cytosol | 86.18 | 86.75 |
| CDX81680 | Canola | cytosol | 85.53 | 86.09 |
| AT1G14880.1 | Thale cress | cytosol | 83.55 | 84.11 |
| CDY45296 | Canola | cytosol | 83.55 | 84.11 |
| Bra026181.1-P | Field mustard | cytosol | 83.55 | 84.11 |
| AT5G35525.1 | Thale cress | cytosol | 83.55 | 83.55 |
| CDY51779 | Canola | endoplasmic reticulum, extracellular | 52.63 | 80.81 |
| KRH47639 | Soybean | endoplasmic reticulum, extracellular | 39.47 | 65.22 |
| KRH41677 | Soybean | extracellular | 61.18 | 53.14 |
| Bra026795.1-P | Field mustard | extracellular | 73.68 | 52.09 |
| KRH60380 | Soybean | plastid | 61.18 | 50.0 |
| Solyc04g007900.2.1 | Tomato | nucleus | 59.87 | 48.92 |
| PGSC0003DMT400075916 | Potato | cytosol, endoplasmic reticulum, nucleus | 60.53 | 48.42 |
| KRH60379 | Soybean | cytosol, plastid, vacuole | 60.53 | 48.17 |
| AT1G68610.1 | Thale cress | cytosol | 48.03 | 45.62 |
| AT3G18470.1 | Thale cress | cytosol, extracellular, vacuole | 37.5 | 42.86 |
| AT1G58320.1 | Thale cress | cytosol | 39.47 | 40.54 |
| VIT_01s0011g05450.t01 | Wine grape | mitochondrion | 55.26 | 37.67 |
| AT3G18460.1 | Thale cress | cytosol, extracellular, nucleus, plastid | 42.76 | 35.33 |
| AT3G18450.1 | Thale cress | plastid | 40.79 | 33.7 |
| AT1G68630.1 | Thale cress | cytosol | 34.87 | 32.92 |
| AT1G52200.1 | Thale cress | plastid | 38.16 | 30.53 |
| AT1G49030.1 | Thale cress | cytosol | 41.45 | 28.12 |
| AT2G40935.9 | Thale cress | cytosol | 32.24 | 25.79 |
| Os02t0286933-00 | Rice | cytosol, nucleus, plastid | 7.89 | 10.81 |
Protein Annotations
| MapMan:35.1 | EntrezGene:838052 | UniProt:A0A178WDU8 | ProteinID:AAF79235.1 | ProteinID:AEE29237.1 | ArrayExpress:AT1G14870 |
| EnsemblPlantsGene:AT1G14870 | RefSeq:AT1G14870 | TAIR:AT1G14870 | RefSeq:AT1G14870-TAIR-G | EnsemblPlants:AT1G14870.1 | TAIR:AT1G14870.1 |
| EMBL:AY072397 | EMBL:AY114701 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006950 |
| GO:GO:0006979 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | RefSeq:NP_172940.1 | ProteinID:OAP16587.1 |
| Symbol:PCR2 | PFAM:PF04749 | InterPro:PLAC_motif_containing | PO:PO:0000036 | PO:PO:0000293 | PO:PO:0005052 |
| PO:PO:0009001 | PO:PO:0009005 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0025034 | PANTHER:PTHR15907 |
| PANTHER:PTHR15907:SF96 | UniProt:Q9LQU4 | TIGRFAMs:TIGR01571 | TMHMM:TMhelix | UniParc:UPI00000AAFFF | : |
Description
PCR2PCR2 [Source:UniProtKB/TrEMBL;Acc:A0A178WDU8]
Coordinates
chr1:-:5128344..5129731
Molecular Weight (calculated)
16743.0 Da
IEP (calculated)
6.908
GRAVY (calculated)
-0.132
Length
152 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAQHLHAKP HAEGEWSTGF CDCFSDCKNC CITFWCPCIT FGQVAEIVDR GSTSCGTAGA LYALIAVVTG CACIYSCFYR GKMRAQYNIK GDDCTDCLKH
101: FCCELCSLTQ QYRELKHRGY DMSLGWAGNV ERQQNQGGVA MGAPVFQGGM TR
101: FCCELCSLTQ QYRELKHRGY DMSLGWAGNV ERQQNQGGVA MGAPVFQGGM TR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.