CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, vacuole, cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 1
golgi 1
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid, vacuole
Any Predictor:	cytosol, mitochondrion, plastid, vacuole
BaCelLo:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH47639	Soybean	endoplasmic reticulum, extracellular	34.03	70.65
KRH60380	Soybean	plastid	68.59	70.43
KRH41677	Soybean	extracellular	63.35	69.14
Bra026796.1-P	Field mustard	cytosol	48.69	61.59
CDY71864	Canola	cytosol	48.17	60.93
CDY33732	Canola	cytosol	48.17	60.93
AT1G14870.1	Thale cress	cytosol, mitochondrion, plasma membrane	48.17	60.53
Bra026181.1-P	Field mustard	cytosol	47.64	60.26
CDY45296	Canola	cytosol	47.64	60.26
Bra026794.1-P	Field mustard	cytosol, plastid, vacuole	45.55	59.18
CDY33731	Canola	cytosol	46.6	58.94
CDX81682	Canola	cytosol, plastid, vacuole	45.03	58.5
CDX81680	Canola	cytosol	46.07	58.28
AT1G14880.1	Thale cress	cytosol	46.07	58.28
CDY51779	Canola	endoplasmic reticulum, extracellular	29.84	57.58
AT5G35525.1	Thale cress	cytosol	45.55	57.24
CDY33730	Canola	cytosol	41.88	52.98
VIT_01s0011g05470.t01	Wine grape	cytosol, plastid	54.97	52.24
CDX81681	Canola	cytosol, plasma membrane, plastid	43.98	51.85
Solyc04g007900.2.1	Tomato	nucleus	47.12	48.39
PGSC0003DMT400075916	Potato	cytosol, endoplasmic reticulum, nucleus	46.6	46.84
KRH34433	Soybean	extracellular, nucleus, vacuole	31.41	44.12
KRH50266	Soybean	cytosol, peroxisome, plastid	43.98	43.52
KRH75408	Soybean	cytosol	32.46	41.61
KRH71150	Soybean	cytosol	42.41	41.54
KRH49878	Soybean	endoplasmic reticulum	34.55	41.51
KRH71889	Soybean	cytosol	36.65	39.11
KRH39230	Soybean	extracellular	30.89	38.31
Bra026795.1-P	Field mustard	extracellular	42.41	37.67
KRH09890	Soybean	cytosol	30.89	35.12
KRH77728	Soybean	extracellular	29.84	30.81
KRH27778	Soybean	extracellular, nucleus, plasma membrane	28.8	29.26
Os02t0286933-00	Rice	cytosol, nucleus, plastid	8.38	14.41

Protein Annotations

EMBL:ACUP02003364	EnsemblPlants:KRH60379	EnsemblPlantsGene:GLYMA_05G236200	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:PLAC_motif_containing	PANTHER:PTHR15907	PANTHER:PTHR15907:SF96	PFAM:PF04749	ProteinID:KRH60379	ProteinID:KRH60379.1
SEG:seg	TIGRFAMs:TIGR01571	TMHMM:TMhelix	UniParc:UPI00023C5467	UniProt:A0A0R0K698	MapMan:35.1

Description

hypothetical protein

Coordinates

chr5:-:41259373..41264057

Molecular Weight (calculated)

21034.2 Da

IEP (calculated)

4.910

GRAVY (calculated)

-0.059

Length

191 amino acids

Sequence
(BLAST)

001: MYEAASSDPR KPSAPATGFP VSYSTSTTEA EVYSYSYGPV VVPVPPPHPK PIVEWSTGLC DCFSDWGNSC MTFWCPCVTF GRVAEIVDRG SPSCGASGAL
101: YTMICCLIGC GWIYSCFYRT KMRRQYMLKE SPCWDCLTHC CCEPCALCQE YRELENRGFD MVIGWQGNVQ GGNQGVAMVP MAPAAVEPMT R

Best Arabidopsis Sequence Match ( AT1G14870.1 )
(BLAST)

001: MEAQHLHAKP HAEGEWSTGF CDCFSDCKNC CITFWCPCIT FGQVAEIVDR GSTSCGTAGA LYALIAVVTG CACIYSCFYR GKMRAQYNIK GDDCTDCLKH
101: FCCELCSLTQ QYRELKHRGY DMSLGWAGNV ERQQNQGGVA MGAPVFQGGM TR

Arabidopsis Description

PCR2PCR2 [Source:UniProtKB/TrEMBL;Acc:A0A178WDU8]
SUBAcon: [mitochondrion,plasma membrane,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.