Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- plasma membrane 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400075916 | Potato | cytosol, endoplasmic reticulum, nucleus | 93.55 | 91.58 |
| KRH47639 | Soybean | endoplasmic reticulum, extracellular | 33.33 | 67.39 |
| CDX81680 | Canola | cytosol | 49.46 | 60.93 |
| CDY33731 | Canola | cytosol | 49.46 | 60.93 |
| Bra026796.1-P | Field mustard | cytosol | 48.92 | 60.26 |
| AT1G14870.1 | Thale cress | cytosol, mitochondrion, plasma membrane | 48.92 | 59.87 |
| CDY71864 | Canola | cytosol | 48.39 | 59.6 |
| CDY33732 | Canola | cytosol | 48.39 | 59.6 |
| Bra026181.1-P | Field mustard | cytosol | 46.77 | 57.62 |
| CDY45296 | Canola | cytosol | 46.77 | 57.62 |
| VIT_01s0011g05470.t01 | Wine grape | cytosol, plastid | 60.22 | 55.72 |
| CDY51779 | Canola | endoplasmic reticulum, extracellular | 29.57 | 55.56 |
| Solyc01g005470.2.1 | Tomato | extracellular | 48.92 | 55.49 |
| AT1G14880.1 | Thale cress | cytosol | 44.62 | 54.97 |
| Solyc02g090730.2.1 | Tomato | plastid | 47.31 | 53.99 |
| AT5G35525.1 | Thale cress | cytosol | 44.09 | 53.95 |
| Bra026794.1-P | Field mustard | cytosol, plastid, vacuole | 41.94 | 53.06 |
| KRH41677 | Soybean | extracellular | 48.92 | 52.0 |
| CDX81682 | Canola | cytosol, plastid, vacuole | 40.86 | 51.7 |
| KRH60380 | Soybean | plastid | 51.08 | 51.08 |
| CDY33730 | Canola | cytosol | 40.86 | 50.33 |
| Solyc12g037950.1.1 | Tomato | extracellular | 38.17 | 47.65 |
| CDX81681 | Canola | cytosol, plasma membrane, plastid | 41.4 | 47.53 |
| KRH60379 | Soybean | cytosol, plastid, vacuole | 48.39 | 47.12 |
| Solyc12g013570.1.1 | Tomato | cytosol | 30.65 | 42.86 |
| Bra026795.1-P | Field mustard | extracellular | 46.77 | 40.47 |
| Solyc05g009620.2.1 | Tomato | plastid | 20.97 | 39.8 |
| Solyc03g120600.2.1 | Tomato | cytosol, peroxisome, plastid | 30.65 | 33.14 |
| Solyc06g066590.2.1 | Tomato | cytosol, nucleus, peroxisome | 30.65 | 31.15 |
| Solyc08g013920.2.1 | Tomato | cytosol, plasma membrane, plastid | 32.8 | 27.85 |
| Solyc10g081410.1.1 | Tomato | cytosol | 27.42 | 27.13 |
| Solyc08g013910.2.1 | Tomato | cytosol | 25.27 | 25.27 |
| Solyc03g119660.1.1 | Tomato | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 41.94 | 18.84 |
| Os02t0286933-00 | Rice | cytosol, nucleus, plastid | 6.45 | 10.81 |
Protein Annotations
| EnsemblPlants:Solyc04g007900.2.1 | EnsemblPlantsGene:Solyc04g007900.2 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:PLAC_motif_containing |
| PANTHER:PTHR15907 | PANTHER:PTHR15907:SF96 | PFAM:PF04749 | TIGRFAMs:TIGR01571 | TMHMM:TMhelix | UniParc:UPI0002766BB9 |
| UniProt:K4BNU7 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr4:+:1572112..1574265
Molecular Weight (calculated)
20895.2 Da
IEP (calculated)
8.085
GRAVY (calculated)
-0.324
Length
186 amino acids
Sequence
(BLAST)
(BLAST)
001: MKSSTISLSD RYQKFSSSGD DTPSPIRSKT RFYVDTMDPQ PAMYRKKKND VPWSTGLCDC MSDPKNCCIT LWCPCITFGQ VAEIIDKGSN SCGVNGALYT
101: IIICVTSCPC IYSCFYRNKM RQQYLLKKSP CGDCLVHCFC EACALCQEYR ELKNQGVDMS IGWHGNVERQ NRGVIIPPTV EGGMNR
101: IIICVTSCPC IYSCFYRNKM RQQYLLKKSP CGDCLVHCFC EACALCQEYR ELKNQGVDMS IGWHGNVERQ NRGVIIPPTV EGGMNR
001: MEAQHLHAKP HAEGEWSTGF CDCFSDCKNC CITFWCPCIT FGQVAEIVDR GSTSCGTAGA LYALIAVVTG CACIYSCFYR GKMRAQYNIK GDDCTDCLKH
101: FCCELCSLTQ QYRELKHRGY DMSLGWAGNV ERQQNQGGVA MGAPVFQGGM TR
101: FCCELCSLTQ QYRELKHRGY DMSLGWAGNV ERQQNQGGVA MGAPVFQGGM TR
Arabidopsis Description
PCR2PCR2 [Source:UniProtKB/TrEMBL;Acc:A0A178WDU8]
SUBAcon: [mitochondrion,plasma membrane,cytosol]
SUBAcon: [mitochondrion,plasma membrane,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.