Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G14870.1 | Thale cress | cytosol, mitochondrion, plasma membrane | 84.11 | 83.55 |
| AT5G35525.1 | Thale cress | cytosol | 80.79 | 80.26 |
| CDY33732 | Canola | cytosol | 78.15 | 78.15 |
| Bra026796.1-P | Field mustard | cytosol | 78.15 | 78.15 |
| CDY71864 | Canola | cytosol | 77.48 | 77.48 |
| CDY45296 | Canola | cytosol | 76.82 | 76.82 |
| Bra026181.1-P | Field mustard | cytosol | 76.82 | 76.82 |
| CDY33731 | Canola | cytosol | 74.83 | 74.83 |
| CDX81680 | Canola | cytosol | 74.17 | 74.17 |
| CDY51779 | Canola | endoplasmic reticulum, extracellular | 48.34 | 73.74 |
| KRH47639 | Soybean | endoplasmic reticulum, extracellular | 37.09 | 60.87 |
| KRH41677 | Soybean | extracellular | 59.6 | 51.43 |
| KRH60380 | Soybean | plastid | 58.28 | 47.31 |
| KRH60379 | Soybean | cytosol, plastid, vacuole | 58.28 | 46.07 |
| Bra026795.1-P | Field mustard | extracellular | 64.24 | 45.12 |
| Solyc04g007900.2.1 | Tomato | nucleus | 54.97 | 44.62 |
| PGSC0003DMT400075916 | Potato | cytosol, endoplasmic reticulum, nucleus | 54.97 | 43.68 |
| AT1G68610.1 | Thale cress | cytosol | 44.37 | 41.88 |
| AT1G58320.1 | Thale cress | cytosol | 39.07 | 39.86 |
| AT3G18470.1 | Thale cress | cytosol, extracellular, vacuole | 32.45 | 36.84 |
| VIT_01s0011g05450.t01 | Wine grape | mitochondrion | 51.66 | 34.98 |
| AT1G68630.1 | Thale cress | cytosol | 35.1 | 32.92 |
| AT3G18460.1 | Thale cress | cytosol, extracellular, nucleus, plastid | 39.74 | 32.61 |
| AT3G18450.1 | Thale cress | plastid | 39.07 | 32.07 |
| AT1G52200.1 | Thale cress | plastid | 37.09 | 29.47 |
| AT1G49030.1 | Thale cress | cytosol | 39.07 | 26.34 |
| AT2G40935.9 | Thale cress | cytosol | 31.13 | 24.74 |
| Os02t0286933-00 | Rice | cytosol, nucleus, plastid | 7.28 | 9.91 |
Protein Annotations
| MapMan:35.1 | EntrezGene:838053 | ProteinID:AAF79233.1 | ProteinID:AEE29238.1 | EMBL:AK118861 | ArrayExpress:AT1G14880 |
| EnsemblPlantsGene:AT1G14880 | RefSeq:AT1G14880 | TAIR:AT1G14880 | RefSeq:AT1G14880-TAIR-G | EnsemblPlants:AT1G14880.1 | TAIR:AT1G14880.1 |
| EMBL:BT005663 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 |
| GO:GO:0005886 | GO:GO:0016020 | GO:GO:0016021 | RefSeq:NP_172941.1 | Symbol:PCR1 | PFAM:PF04749 |
| InterPro:PLAC_motif_containing | PO:PO:0000293 | PANTHER:PTHR15907 | PANTHER:PTHR15907:SF92 | UniProt:Q9LQU2 | TIGRFAMs:TIGR01571 |
| UniParc:UPI000000C6EE | : | : | : | : | : |
Description
PCR1Protein PLANT CADMIUM RESISTANCE 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQU2]
Coordinates
chr1:-:5132506..5133860
Molecular Weight (calculated)
16503.9 Da
IEP (calculated)
7.658
GRAVY (calculated)
-0.109
Length
151 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAQLHAKPH AQGEWSTGFC DCFSDCRNCC ITLCCPCITF GQVAEIVDRG SKSCCAAGAL YMLIDLITSC GRMYACFYSG KMRAQYNIKG DGCTDCLKHF
101: CCNLCALTQQ YRELKHRGFD MSLGWAGNAE KQQNQGGVAM GAPAFQGGMT R
101: CCNLCALTQQ YRELKHRGFD MSLGWAGNAE KQQNQGGVAM GAPAFQGGMT R
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.