Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra018953.1-P | Field mustard | plastid | 77.89 | 78.72 |
| PGSC0003DMT400006535 | Potato | cytosol, extracellular, plastid | 43.68 | 69.17 |
| Solyc03g120600.2.1 | Tomato | cytosol, peroxisome, plastid | 56.32 | 62.21 |
| KRH09890 | Soybean | cytosol | 53.16 | 60.12 |
| PGSC0003DMT400042614 | Potato | cytosol, mitochondrion, peroxisome | 54.74 | 56.83 |
| Solyc06g066590.2.1 | Tomato | cytosol, nucleus, peroxisome | 53.68 | 55.74 |
| VIT_09s0002g04180.t01 | Wine grape | cytosol | 55.79 | 54.92 |
| AT3G18470.1 | Thale cress | cytosol, extracellular, vacuole | 30.53 | 43.61 |
| AT1G58320.1 | Thale cress | cytosol | 30.53 | 39.19 |
| AT1G14870.1 | Thale cress | cytosol, mitochondrion, plasma membrane | 30.53 | 38.16 |
| AT5G35525.1 | Thale cress | cytosol | 30.0 | 37.5 |
| AT1G14880.1 | Thale cress | cytosol | 29.47 | 37.09 |
| AT3G18460.1 | Thale cress | cytosol, extracellular, nucleus, plastid | 35.79 | 36.96 |
| AT3G18450.1 | Thale cress | plastid | 34.74 | 35.87 |
| AT1G68610.1 | Thale cress | cytosol | 28.95 | 34.38 |
| AT1G68630.1 | Thale cress | cytosol | 25.79 | 30.43 |
| GSMUA_Achr5P22960_001 | Banana | plastid | 42.63 | 30.11 |
| AT1G49030.1 | Thale cress | cytosol | 34.74 | 29.46 |
| AT2G40935.9 | Thale cress | cytosol | 22.11 | 22.11 |
| GSMUA_Achr10P... | Banana | extracellular, plasma membrane | 42.63 | 19.38 |
Protein Annotations
| MapMan:35.1 | EntrezGene:841650 | ProteinID:AAF29406.2 | ProteinID:AEE32768.1 | EMBL:AK227386 | ArrayExpress:AT1G52200 |
| EnsemblPlantsGene:AT1G52200 | RefSeq:AT1G52200 | TAIR:AT1G52200 | RefSeq:AT1G52200-TAIR-G | EnsemblPlants:AT1G52200.1 | TAIR:AT1G52200.1 |
| EMBL:AY085651 | EMBL:BT004773 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006950 |
| GO:GO:0006979 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | RefSeq:NP_564602.1 | PFAM:PF04749 |
| InterPro:PLAC_motif_containing | PO:PO:0000013 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0007095 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009031 | PO:PO:0009047 | PO:PO:0020030 | PO:PO:0020100 | PO:PO:0025022 |
| PANTHER:PTHR15907 | PANTHER:PTHR15907:SF46 | UniProt:Q9M815 | TIGRFAMs:TIGR01571 | TMHMM:TMhelix | UniParc:UPI000000C47B |
Description
PCR8Protein PLANT CADMIUM RESISTANCE 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9M815]
Coordinates
chr1:-:19441636..19443624
Molecular Weight (calculated)
21180.3 Da
IEP (calculated)
5.759
GRAVY (calculated)
-0.374
Length
190 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRVTTPSEE DSNNGLPVQQ PGTPNQRTRV PVSQFAPPNY QQANVNLSVG RPWSTGLFDC QADQANAVLT TIVPCVTFGQ IAEVMDEGEM TCPLGTFMYL
101: LMMPALCSHW VMGSKYREKM RRKFNLVEAP YSDCASHVLC PCCSLCQEYR ELKIRNLDPS LGWNGILAQG QGQYEREAPS FAPTNQYMSK
101: LMMPALCSHW VMGSKYREKM RRKFNLVEAP YSDCASHVLC PCCSLCQEYR ELKIRNLDPS LGWNGILAQG QGQYEREAPS FAPTNQYMSK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.