Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 3
- golgi 2
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400006535 | Potato | cytosol, extracellular, plastid | 55.95 | 78.33 |
| Solyc03g120600.2.1 | Tomato | cytosol, peroxisome, plastid | 66.67 | 65.12 |
| VIT_09s0002g04180.t01 | Wine grape | cytosol | 71.43 | 62.18 |
| PGSC0003DMT400042614 | Potato | cytosol, mitochondrion, peroxisome | 65.48 | 60.11 |
| Solyc06g066590.2.1 | Tomato | cytosol, nucleus, peroxisome | 64.88 | 59.56 |
| Bra018953.1-P | Field mustard | plastid | 61.31 | 54.79 |
| AT1G52200.1 | Thale cress | plastid | 60.12 | 53.16 |
| KRH34433 | Soybean | extracellular, nucleus, vacuole | 31.55 | 38.97 |
| KRH47639 | Soybean | endoplasmic reticulum, extracellular | 20.24 | 36.96 |
| KRH75408 | Soybean | cytosol | 32.74 | 36.91 |
| GSMUA_Achr5P22960_001 | Banana | plastid | 54.76 | 34.2 |
| KRH41677 | Soybean | extracellular | 34.52 | 33.14 |
| KRH39230 | Soybean | extracellular | 29.17 | 31.82 |
| KRH60379 | Soybean | cytosol, plastid, vacuole | 35.12 | 30.89 |
| KRH60380 | Soybean | plastid | 32.74 | 29.57 |
| KRH50266 | Soybean | cytosol, peroxisome, plastid | 33.33 | 29.02 |
| KRH71150 | Soybean | cytosol | 33.33 | 28.72 |
| KRH49878 | Soybean | endoplasmic reticulum | 26.79 | 28.3 |
| KRH71889 | Soybean | cytosol | 29.76 | 27.93 |
| KRH77728 | Soybean | extracellular | 25.0 | 22.7 |
| KRH27778 | Soybean | extracellular, nucleus, plasma membrane | 25.0 | 22.34 |
| GSMUA_Achr10P... | Banana | extracellular, plasma membrane | 51.19 | 20.57 |
Protein Annotations
| EMBL:ACUP02009113 | EMBL:BT096345 | EnsemblPlants:KRH09890 | EnsemblPlantsGene:GLYMA_15G016800 | EntrezGene:100788713 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006950 | GO:GO:0006979 | GO:GO:0008150 | GO:GO:0016020 |
| InterPro:PLAC_motif_containing | PANTHER:PTHR15907 | PANTHER:PTHR15907:SF46 | PFAM:PF04749 | ProteinID:KRH09890 | ProteinID:KRH09890.1 |
| TIGRFAMs:TIGR01571 | UniParc:UPI0001B16628 | UniProt:C6TFF7 | MapMan:35.1 | : | : |
Description
hypothetical protein
Coordinates
chr15:+:1305746..1307973
Molecular Weight (calculated)
18991.9 Da
IEP (calculated)
6.233
GRAVY (calculated)
-0.260
Length
168 amino acids
Sequence
(BLAST)
(BLAST)
001: MQGIEDQKIQ QNEPVGSIAP RYEADRIQQI GNPWSTGLFD CHENQTNAVM TAFFPCVTFG QIAEVQDGGE LSCHLGSFIY LLMMPALCSQ WIMGSKYRTK
101: LRKRYNLVEA PYTDIVSHIF CPCCSLCQEF RELKIRGLDP ALGWNGILAQ QQSDQTLKNP PLNQVMSK
101: LRKRYNLVEA PYTDIVSHIF CPCCSLCQEF RELKIRGLDP ALGWNGILAQ QQSDQTLKNP PLNQVMSK
001: MGRVTTPSEE DSNNGLPVQQ PGTPNQRTRV PVSQFAPPNY QQANVNLSVG RPWSTGLFDC QADQANAVLT TIVPCVTFGQ IAEVMDEGEM TCPLGTFMYL
101: LMMPALCSHW VMGSKYREKM RRKFNLVEAP YSDCASHVLC PCCSLCQEYR ELKIRNLDPS LGWNGILAQG QGQYEREAPS FAPTNQYMSK
101: LMMPALCSHW VMGSKYREKM RRKFNLVEAP YSDCASHVLC PCCSLCQEYR ELKIRNLDPS LGWNGILAQG QGQYEREAPS FAPTNQYMSK
Arabidopsis Description
PCR8Protein PLANT CADMIUM RESISTANCE 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9M815]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.