CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 3
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY51779	Canola	endoplasmic reticulum, extracellular	52.17	48.48
KRH41677	Soybean	extracellular	84.78	44.57
KRH60380	Soybean	plastid	85.87	42.47
AT1G14870.1	Thale cress	cytosol, mitochondrion, plasma membrane	65.22	39.47
Bra026796.1-P	Field mustard	cytosol	63.04	38.41
CDY71864	Canola	cytosol	63.04	38.41
AT5G35525.1	Thale cress	cytosol	63.04	38.16
Bra026181.1-P	Field mustard	cytosol	61.96	37.75
CDY45296	Canola	cytosol	61.96	37.75
CDY33732	Canola	cytosol	61.96	37.75
AT1G14880.1	Thale cress	cytosol	60.87	37.09
Bra026794.1-P	Field mustard	cytosol, plastid, vacuole	58.7	36.73
CDY33731	Canola	cytosol	59.78	36.42
CDX81680	Canola	cytosol	59.78	36.42
CDX81682	Canola	cytosol, plastid, vacuole	57.61	36.05
KRH60379	Soybean	cytosol, plastid, vacuole	70.65	34.03
CDX81681	Canola	cytosol, plasma membrane, plastid	59.78	33.95
Solyc04g007900.2.1	Tomato	nucleus	67.39	33.33
VIT_01s0011g05470.t01	Wine grape	cytosol, plastid	72.83	33.33
PGSC0003DMT400075916	Potato	cytosol, endoplasmic reticulum, nucleus	68.48	33.16
CDY33730	Canola	cytosol	54.35	33.11
KRH34433	Soybean	extracellular, nucleus, vacuole	46.74	31.62
KRH75408	Soybean	cytosol	46.74	28.86
KRH49878	Soybean	endoplasmic reticulum	48.91	28.3
KRH50266	Soybean	cytosol, peroxisome, plastid	55.43	26.42
KRH71150	Soybean	cytosol	55.43	26.15
Bra026795.1-P	Field mustard	extracellular	59.78	25.58
KRH71889	Soybean	cytosol	48.91	25.14
KRH39230	Soybean	extracellular	40.22	24.03
KRH09890	Soybean	cytosol	36.96	20.24
KRH77728	Soybean	extracellular	32.61	16.22
KRH27778	Soybean	extracellular, nucleus, plasma membrane	31.52	15.43
Os02t0286933-00	Rice	cytosol, nucleus, plastid	1.09	0.9

Protein Annotations

EMBL:ACUP02004156	EnsemblPlants:KRH47639	EnsemblPlantsGene:GLYMA_07G041300	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:PLAC_motif_containing	PANTHER:PTHR15907	PANTHER:PTHR15907:SF92	PFAM:PF04749	ProteinID:KRH47639	ProteinID:KRH47639.1
TIGRFAMs:TIGR01571	TMHMM:TMhelix	UniParc:UPI0006EDE010	UniProt:A0A0R0IZ80	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr7:-:3431660..3432111

Molecular Weight (calculated)

10306.4 Da

IEP (calculated)

8.032

GRAVY (calculated)

-0.215

Length

92 amino acids

Sequence
(BLAST)

1: AEIVDKGSTS CGASGALYTL ICCVVGCGWL YSCFYRSKMR QQYGLKGNGC TDCLLHCCCE SCTLSQEYRE LKQRGFDMII GWHGNVEQRS RK

Best Arabidopsis Sequence Match ( AT1G14870.1 )
(BLAST)

001: MEAQHLHAKP HAEGEWSTGF CDCFSDCKNC CITFWCPCIT FGQVAEIVDR GSTSCGTAGA LYALIAVVTG CACIYSCFYR GKMRAQYNIK GDDCTDCLKH
101: FCCELCSLTQ QYRELKHRGY DMSLGWAGNV ERQQNQGGVA MGAPVFQGGM TR

Arabidopsis Description

PCR2PCR2 [Source:UniProtKB/TrEMBL;Acc:A0A178WDU8]
SUBAcon: [mitochondrion,plasma membrane,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.