CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra026796.1-P	Field mustard	cytosol	98.68	98.68
CDY33732	Canola	cytosol	98.68	98.68
CDY45296	Canola	cytosol	92.05	92.05
CDY33731	Canola	cytosol	92.05	92.05
CDX81680	Canola	cytosol	91.39	91.39
CDY51779	Canola	endoplasmic reticulum, extracellular	58.28	88.89
AT1G14870.1	Thale cress	cytosol, mitochondrion, plasma membrane	86.75	86.18
AT1G14880.1	Thale cress	cytosol	77.48	77.48
AT5G35525.1	Thale cress	cytosol	77.48	76.97
CDX81682	Canola	cytosol, plastid, vacuole	68.21	70.07
CDY33730	Canola	cytosol	63.58	63.58
KRH47639	Soybean	endoplasmic reticulum, extracellular	38.41	63.04
CDX81681	Canola	cytosol, plasma membrane, plastid	64.24	59.88
KRH41677	Soybean	extracellular	59.6	51.43
KRH60380	Soybean	plastid	62.25	50.54
Solyc04g007900.2.1	Tomato	nucleus	59.6	48.39
KRH60379	Soybean	cytosol, plastid, vacuole	60.93	48.17
PGSC0003DMT400075916	Potato	cytosol, endoplasmic reticulum, nucleus	59.6	47.37
CDX96001	Canola	cytosol	45.7	42.33
CDX92238	Canola	plasma membrane	37.09	42.11
CDY24480	Canola	cytosol, extracellular, vacuole	37.09	42.11
CDY62851	Canola	cytosol, extracellular, plasma membrane	42.38	40.76
CDY29143	Canola	cytosol	39.07	39.33
VIT_01s0011g05450.t01	Wine grape	mitochondrion	56.29	38.12
CDY48592	Canola	plastid	43.71	37.71
CDX92237	Canola	cytosol	43.05	37.57
CDY70500	Canola	cytosol	37.09	36.13
CDY71552	Canola	plastid	45.03	33.66
CDY39895	Canola	cytosol	35.76	33.13
CDY07373	Canola	cytosol	34.44	32.3
CDY04241	Canola	cytosol	34.44	32.3
CDY62854	Canola	cytosol	45.03	31.19
CDY38607	Canola	plasma membrane	31.79	29.81
CDX96000	Canola	plasma membrane	31.79	29.81
CDY53672	Canola	cytosol	32.45	26.2
CDY57571	Canola	cytosol	33.11	26.04
CDY38687	Canola	cytosol	35.1	25.98
CDY57415	Canola	cytosol	32.45	25.39
CDY06953	Canola	cytosol	32.45	25.39
Os02t0286933-00	Rice	cytosol, nucleus, plastid	6.62	9.01

Protein Annotations

EnsemblPlants:CDY71864	EnsemblPlantsGene:GSBRNA2T00020843001	InterPro:PLAC_motif_containing	PANTHER:PTHR15907	PANTHER:PTHR15907:SF92	PFAM:PF04749
ProteinID:CDY71864	ProteinID:CDY71864.1	TIGRFAMs:TIGR01571	TMHMM:TMhelix	UniParc:UPI0004EDAFC5	UniProt:A0A078JYV3
MapMan:35.1	:	:	:	:	:

Description

BnaAnng39070DBnaAnng39070D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JYV3]

Coordinates

chrLK047854:+:536..1650

Molecular Weight (calculated)

16555.7 Da

IEP (calculated)

6.666

GRAVY (calculated)

-0.164

Length

151 amino acids

Sequence
(BLAST)

001: MEAQHLHAKP QAEGEWSTGF CDCFSDCKNC CITCWCPGIT FGQVAEIVDQ GSTTCGTAGA LYTLISCFTG CGCIYSCFYR GKMRAQYNIG GNDCGDCLKH
101: FFCELCALTQ QYRELKNRGF NMDLGWAGNV QRQQNQGVAM GAPVFQGGMT R

Best Arabidopsis Sequence Match ( AT1G14870.1 )
(BLAST)

001: MEAQHLHAKP HAEGEWSTGF CDCFSDCKNC CITFWCPCIT FGQVAEIVDR GSTSCGTAGA LYALIAVVTG CACIYSCFYR GKMRAQYNIK GDDCTDCLKH
101: FCCELCSLTQ QYRELKHRGY DMSLGWAGNV ERQQNQGGVA MGAPVFQGGM TR

Arabidopsis Description

PCR2PCR2 [Source:UniProtKB/TrEMBL;Acc:A0A178WDU8]
SUBAcon: [mitochondrion,plasma membrane,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.