Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- cytosol 1
- nucleus 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os03t0830200-00 | Rice | extracellular | 14.41 | 10.67 |
| Os03t0830400-01 | Rice | extracellular | 13.51 | 10.14 |
| Os03t0830500-01 | Rice | plasma membrane | 11.71 | 9.22 |
| Os10t0112100-01 | Rice | cytosol, plasma membrane, plastid | 15.32 | 9.14 |
| KRH41677 | Soybean | extracellular | 13.51 | 8.57 |
| Os03t0830300-00 | Rice | extracellular | 12.61 | 8.43 |
| KRH60379 | Soybean | cytosol, plastid, vacuole | 14.41 | 8.38 |
| VIT_01s0011g05450.t01 | Wine grape | mitochondrion | 16.22 | 8.07 |
| KRH60380 | Soybean | plastid | 13.51 | 8.06 |
| Bra026181.1-P | Field mustard | cytosol | 10.81 | 7.95 |
| CDY45296 | Canola | cytosol | 10.81 | 7.95 |
| AT1G14870.1 | Thale cress | cytosol, mitochondrion, plasma membrane | 10.81 | 7.89 |
| Os04t0461600-01 | Rice | cytosol | 12.61 | 7.82 |
| PGSC0003DMT400075916 | Potato | cytosol, endoplasmic reticulum, nucleus | 12.61 | 7.37 |
| Os03t0829900-00 | Rice | extracellular | 9.01 | 7.35 |
| Os02t0580000-02 | Rice | cytosol | 9.91 | 7.28 |
| AT1G14880.1 | Thale cress | cytosol | 9.91 | 7.28 |
| AT5G35525.1 | Thale cress | cytosol | 9.91 | 7.24 |
| Os06t0520733-00 | Rice | extracellular | 7.21 | 7.08 |
| VIT_01s0011g05470.t01 | Wine grape | cytosol, plastid | 12.61 | 6.97 |
| CDX81681 | Canola | cytosol, plasma membrane, plastid | 9.91 | 6.79 |
| Os02t0579800-01 | Rice | cytosol, extracellular, plastid | 9.91 | 6.79 |
| CDY33732 | Canola | cytosol | 9.01 | 6.62 |
| CDY33731 | Canola | cytosol | 9.01 | 6.62 |
| CDX81680 | Canola | cytosol | 9.01 | 6.62 |
| Bra026796.1-P | Field mustard | cytosol | 9.01 | 6.62 |
| CDY71864 | Canola | cytosol | 9.01 | 6.62 |
| Solyc04g007900.2.1 | Tomato | nucleus | 10.81 | 6.45 |
| Bra026794.1-P | Field mustard | cytosol, plastid, vacuole | 8.11 | 6.12 |
| Os02t0763000-01 | Rice | plasma membrane | 9.91 | 6.08 |
| Os06t0266266-00 | Rice | mitochondrion | 12.61 | 6.01 |
| CDY33730 | Canola | cytosol | 8.11 | 5.96 |
| CDX81682 | Canola | cytosol, plastid, vacuole | 7.21 | 5.44 |
| Bra026795.1-P | Field mustard | extracellular | 5.41 | 2.79 |
| Os01t0267400-01 | Rice | cytosol, extracellular, plastid | 2.7 | 2.04 |
| CDY51779 | Canola | endoplasmic reticulum, extracellular | 1.8 | 2.02 |
| KRH47639 | Soybean | endoplasmic reticulum, extracellular | 0.9 | 1.09 |
Protein Annotations
| EnsemblPlants:Os02t0286933-00 | EnsemblPlantsGene:Os02g0286933 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | ProteinID:BAS78158.1 |
| UniParc:UPI0003939501 | UniProt:A0A0P0VHQ4 | MapMan:35.2 | : | : | : |
Description
Conserved hypothetical protein. (Os02t0286933-00)
Coordinates
chr2:+:10807538..10810831
Molecular Weight (calculated)
12358.6 Da
IEP (calculated)
6.213
GRAVY (calculated)
-0.547
Length
111 amino acids
Sequence
(BLAST)
(BLAST)
001: MLPNGCDATN SDVKVQENSA SCHGCSMRWQ EWQDLRGSPL SKGQVPPWLC SRVRPRQCVG KIHSNAMNTQ VDVENVDVVI KPRMVPAHQG WQTSLCDCFG
101: DGCESCMQSY D
101: DGCESCMQSY D
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.