Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- plasma membrane 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G430000.1 | Wheat | cytosol, extracellular, nucleus | 60.34 | 77.14 |
| HORVU5Hr1G103960.1 | Barley | extracellular | 59.78 | 76.43 |
| TraesCS5D01G436100.1 | Wheat | extracellular | 59.22 | 75.71 |
| TraesCS7D01G522100.1 | Wheat | endoplasmic reticulum, extracellular | 56.42 | 73.19 |
| EES12297 | Sorghum | extracellular | 61.45 | 71.43 |
| HORVU2Hr1G080550.1 | Barley | cytosol | 29.61 | 69.74 |
| TraesCS2B01G344100.1 | Wheat | cytosol | 54.19 | 68.79 |
| TraesCS5B01G009000.1 | Wheat | plastid | 56.42 | 66.01 |
| TraesCS2D01G325100.1 | Wheat | endoplasmic reticulum, extracellular | 35.2 | 65.62 |
| HORVU4Hr1G085480.3 | Barley | cytosol, plastid | 61.45 | 63.22 |
| Os02t0580000-02 | Rice | cytosol | 46.37 | 54.97 |
| TraesCS5A01G428100.1 | Wheat | plastid | 31.28 | 54.9 |
| Os03t0830400-01 | Rice | extracellular | 45.25 | 54.73 |
| Os03t0830500-01 | Rice | plasma membrane | 41.34 | 52.48 |
| Os02t0579800-01 | Rice | cytosol, extracellular, plastid | 46.93 | 51.85 |
| Os03t0830200-00 | Rice | extracellular | 43.02 | 51.33 |
| Os03t0829900-00 | Rice | extracellular | 37.43 | 49.26 |
| Os06t0520733-00 | Rice | extracellular | 30.17 | 47.79 |
| KRH49878 | Soybean | endoplasmic reticulum | 35.2 | 39.62 |
| Os02t0763000-01 | Rice | plasma membrane | 39.11 | 38.67 |
| Os10t0112100-01 | Rice | cytosol, plasma membrane, plastid | 35.75 | 34.41 |
| Os06t0266266-00 | Rice | mitochondrion | 41.34 | 31.76 |
| Os03t0830300-00 | Rice | extracellular | 29.05 | 31.33 |
| Os01t0267400-01 | Rice | cytosol, extracellular, plastid | 25.7 | 31.29 |
| Os02t0286933-00 | Rice | cytosol, nucleus, plastid | 7.82 | 12.61 |
Protein Annotations
| EnsemblPlants:Os04t0461600-01 | EnsemblPlantsGene:Os04g0461600 | InterPro:PLAC_motif_containing | PANTHER:PTHR15907 | PANTHER:PTHR15907:SF98 | PFAM:PF04749 |
| ProteinID:BAF14911.1 | ProteinID:BAS89555.1 | TIGRFAMs:TIGR01571 | UniParc:UPI0000DD90FD | UniProt:Q0JCM6 | MapMan:35.1 |
Description
Similar to Fw2.2. (Os04t0461600-01)
Coordinates
chr4:-:23059610..23060936
Molecular Weight (calculated)
19745.5 Da
IEP (calculated)
6.895
GRAVY (calculated)
-0.256
Length
179 amino acids
Sequence
(BLAST)
(BLAST)
001: SPTDERFLHF TERVRAAASH PRESIDDPWP AATRREANNP PVASWSSGLC DCYDDVGGCC LTFFCPCVAF GRIAEIVDQG ATSCCARGTL YMLLAMATGF
101: ACAYSCCYRS RLHQQYGLQE KPCGDCCVHW CCGPCALCQE YRELKSRGFD MSLGWQGNME RMGKGVATAP PQMHPGMTR
101: ACAYSCCYRS RLHQQYGLQE KPCGDCCVHW CCGPCALCQE YRELKSRGFD MSLGWQGNME RMGKGVATAP PQMHPGMTR
001: MASQHLQANP HAEGEWSTGF CDCFSDCQNC CITWLCPCIT FGQVADIVDR GNTSCGTAGA LYVLLAAITG CGCLYSCIYR GKIRAQYNIR GDGCTDCLKH
101: FCCELCALTQ EYRELKHRGF DMSLGWAGNV EKQQNQGGVA MGAPAFQGGM SR
101: FCCELCALTQ EYRELKHRGF DMSLGWAGNV EKQQNQGGVA MGAPAFQGGM SR
Arabidopsis Description
PCR3Protein PLANT CADMIUM RESISTANCE 3 [Source:UniProtKB/Swiss-Prot;Acc:P0CW97]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.