Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- mitochondrion 2
- cytosol 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| plasma membrane:
27800704
|
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES05849 | Sorghum | plastid | 80.66 | 77.66 |
| Zm00001d052171_P001 | Maize | cytosol, mitochondrion, plastid | 80.11 | 76.72 |
| TraesCS6D01G300700.1 | Wheat | plastid | 74.03 | 71.66 |
| TraesCS6B01G351700.1 | Wheat | plastid | 74.03 | 71.66 |
| TraesCS6A01G321000.1 | Wheat | plastid | 74.03 | 71.66 |
| PGSC0003DMT400040788 | Potato | cytosol | 25.41 | 69.7 |
| GSMUA_Achr6P02280_001 | Banana | cytosol | 64.64 | 64.29 |
| Solyc02g090730.2.1 | Tomato | plastid | 50.83 | 56.44 |
| VIT_03s0063g00570.t01 | Wine grape | cytosol | 54.14 | 54.14 |
| Os03t0830400-01 | Rice | extracellular | 43.65 | 53.38 |
| Os03t0830500-01 | Rice | plasma membrane | 40.88 | 52.48 |
| Os03t0830200-00 | Rice | extracellular | 43.09 | 52.0 |
| Os02t0580000-02 | Rice | cytosol | 41.99 | 50.33 |
| KRH50266 | Soybean | cytosol, peroxisome, plastid | 53.59 | 50.26 |
| Os02t0579800-01 | Rice | cytosol, extracellular, plastid | 43.65 | 48.77 |
| KRH71150 | Soybean | cytosol | 51.93 | 48.21 |
| Os03t0829900-00 | Rice | extracellular | 35.36 | 47.06 |
| KRH71889 | Soybean | cytosol | 46.41 | 46.93 |
| VIT_03s0063g00550.t01 | Wine grape | cytosol | 55.8 | 46.76 |
| VIT_03s0063g00560.t01 | Wine grape | cytosol | 54.14 | 45.16 |
| Os06t0520733-00 | Rice | extracellular | 24.86 | 39.82 |
| Os04t0461600-01 | Rice | cytosol | 38.67 | 39.11 |
| Os10t0112100-01 | Rice | cytosol, plasma membrane, plastid | 34.25 | 33.33 |
| Os06t0266266-00 | Rice | mitochondrion | 36.46 | 28.33 |
| Os03t0830300-00 | Rice | extracellular | 25.97 | 28.31 |
| Os01t0267400-01 | Rice | cytosol, extracellular, plastid | 22.65 | 27.89 |
| Os02t0286933-00 | Rice | cytosol, nucleus, plastid | 6.08 | 9.91 |
Protein Annotations
| EnsemblPlants:Os02t0763000-01 | EnsemblPlantsGene:Os02g0763000 | EntrezGene:4330820 | InterPro:PLAC_motif_containing | PANTHER:PTHR15907 | PANTHER:PTHR15907:SF95 |
| PFAM:PF04749 | ProteinID:BAD17104.1 | ProteinID:BAD17219.1 | ProteinID:BAF10122.1 | ProteinID:BAS81047.1 | ProteinID:EEE57853.1 |
| RefSeq:XP_015623918.1 | SEG:seg | TIGRFAMs:TIGR01571 | TMHMM:TMhelix | UniParc:UPI000035ADEB | UniProt:Q6Z6F9 |
| MapMan:35.1 | : | : | : | : | : |
Description
FW2.2-like 1Protein of unknown function Cys-rich family protein. (Os02t0763000-01)
Coordinates
chr2:+:32155213..32156315
Molecular Weight (calculated)
19458.4 Da
IEP (calculated)
6.428
GRAVY (calculated)
-0.046
Length
181 amino acids
Sequence
(BLAST)
(BLAST)
001: MYPSAPPDAY NKYSAGAPPT APPPATYQLP TMNTPRTGGG LTRWSTGLFH CMDDPGNCLI TCVCPCITFG QVADIVDKGT CPCLASGTAY ALLCASGMGC
101: LYSCFYRSKM RAQFDLDEGD CPDFLVHFCC EYCALCQEYR ELKNRGFDLG IGWAANVDRQ RRGVTGASVM GAPGVPVGMM R
101: LYSCFYRSKM RAQFDLDEGD CPDFLVHFCC EYCALCQEYR ELKNRGFDLG IGWAANVDRQ RRGVTGASVM GAPGVPVGMM R
001: MGRPGSQPNE AQPPPVQVQP TVNRDNQVHS QNGAIGQANI QTGRPVNNQT QNLWSSDLFD CMNDSENAVI TCLAPCVTLG QIAEIVDEGA TPCATGGLLY
101: GMIFFIGVPF VYSCMFRAKM RNKYGLPDAP APDWITHLFC EHCALCQEYR ELKHRGFDPN IGWAGNVQAQ QPVMSPPTGQ RMMG
101: GMIFFIGVPF VYSCMFRAKM RNKYGLPDAP APDWITHLFC EHCALCQEYR ELKHRGFDPN IGWAGNVQAQ QPVMSPPTGQ RMMG
Arabidopsis Description
PCR4Protein PLANT CADMIUM RESISTANCE 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LS44]
SUBAcon: [plastid,extracellular,nucleus,cytosol]
SUBAcon: [plastid,extracellular,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.