Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- mitochondrion 2
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400040788 | Potato | cytosol | 25.82 | 71.21 |
| Os02t0763000-01 | Rice | plasma membrane | 64.29 | 64.64 |
| EES05849 | Sorghum | plastid | 64.29 | 62.23 |
| Zm00001d052171_P001 | Maize | cytosol, mitochondrion, plastid | 63.74 | 61.38 |
| TraesCS6D01G300700.1 | Wheat | plastid | 60.99 | 59.36 |
| TraesCS6B01G351700.1 | Wheat | plastid | 60.99 | 59.36 |
| TraesCS6A01G321000.1 | Wheat | plastid | 60.99 | 59.36 |
| Solyc02g090730.2.1 | Tomato | plastid | 52.75 | 58.9 |
| VIT_03s0063g00570.t01 | Wine grape | cytosol | 52.2 | 52.49 |
| GSMUA_Achr7P18760_001 | Banana | cytosol, extracellular, mitochondrion | 45.05 | 48.81 |
| GSMUA_Achr7P18730_001 | Banana | cytosol, extracellular, plastid | 48.35 | 48.35 |
| KRH50266 | Soybean | cytosol, peroxisome, plastid | 51.1 | 48.19 |
| GSMUA_Achr7P18750_001 | Banana | cytosol, extracellular, plasma membrane | 47.25 | 47.25 |
| GSMUA_Achr9P27300_001 | Banana | cytosol, plastid, vacuole | 43.96 | 45.71 |
| VIT_03s0063g00550.t01 | Wine grape | cytosol | 53.85 | 45.37 |
| KRH71150 | Soybean | cytosol | 48.35 | 45.13 |
| GSMUA_AchrUn_... | Banana | plastid | 45.6 | 45.11 |
| VIT_03s0063g00560.t01 | Wine grape | cytosol | 52.75 | 44.24 |
| KRH71889 | Soybean | cytosol | 42.86 | 43.58 |
| GSMUA_Achr6P32110_001 | Banana | extracellular, peroxisome, plasma membrane | 29.12 | 28.19 |
| GSMUA_Achr9P05180_001 | Banana | endoplasmic reticulum, extracellular | 18.68 | 22.22 |
| GSMUA_Achr5P22960_001 | Banana | plastid | 28.57 | 19.33 |
| GSMUA_Achr10P... | Banana | extracellular, plasma membrane | 31.87 | 13.88 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr6P02280_001 | EnsemblPlants:GSMUA_Achr6T02280_001 | EnsemblPlantsGene:GSMUA_Achr6G02280_001 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:PLAC_motif_containing | PANTHER:PTHR15907 | PANTHER:PTHR15907:SF95 | PFAM:PF04749 | SEG:seg | TIGRFAMs:TIGR01571 |
| TMHMM:TMhelix | UniParc:UPI00029670A3 | UniProt:M0T3H6 | MapMan:35.1 | : | : |
Description
Uncharacterized protein At1g14870 [Source:GMGC_GENE;Acc:GSMUA_Achr6G02280_001]
Coordinates
chr6:+:1467080..1467914
Molecular Weight (calculated)
19872.3 Da
IEP (calculated)
6.975
GRAVY (calculated)
-0.060
Length
182 amino acids
Sequence
(BLAST)
(BLAST)
001: MYPSLSPHLH DKYGMTIPVP VPPETHSSPY TPAAMPSRAR GSITPWSTGL CHCMDDPGNC LVTCLCPCIT FGQIADIVDE GTCSCVASGT VYGLLCLTGM
101: ACLYSCFYRS RMRGQHDLEE GPVPDCLIHC CCEPCALCQE YRELRNKGFD MGIGWRANME RQRRGVMLAP AMGAPAIGGM RR
101: ACLYSCFYRS RMRGQHDLEE GPVPDCLIHC CCEPCALCQE YRELRNKGFD MGIGWRANME RQRRGVMLAP AMGAPAIGGM RR
001: MASQHLQANP HAEGEWSTGF CDCFSDCQNC CITWLCPCIT FGQVADIVDR GNTSCGTAGA LYVLLAAITG CGCLYSCIYR GKIRAQYNIR GDGCTDCLKH
101: FCCELCALTQ EYRELKHRGF DMSLGWAGNV EKQQNQGGVA MGAPAFQGGM SR
101: FCCELCALTQ EYRELKHRGF DMSLGWAGNV EKQQNQGGVA MGAPAFQGGM SR
Arabidopsis Description
PCR3Protein PLANT CADMIUM RESISTANCE 3 [Source:UniProtKB/Swiss-Prot;Acc:P0CW97]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.