Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- plastid 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400040788 | Potato | cytosol | 40.49 | 100.0 |
| Solyc01g005470.2.1 | Tomato | extracellular | 53.99 | 53.66 |
| GSMUA_Achr6P02280_001 | Banana | cytosol | 58.9 | 52.75 |
| Os02t0763000-01 | Rice | plasma membrane | 56.44 | 50.83 |
| Solyc12g037950.1.1 | Tomato | extracellular | 46.01 | 50.34 |
| TraesCS6D01G300700.1 | Wheat | plastid | 56.44 | 49.2 |
| TraesCS6B01G351700.1 | Wheat | plastid | 56.44 | 49.2 |
| TraesCS6A01G321000.1 | Wheat | plastid | 56.44 | 49.2 |
| EES05849 | Sorghum | plastid | 55.83 | 48.4 |
| Solyc04g007900.2.1 | Tomato | nucleus | 53.99 | 47.31 |
| Zm00001d052171_P001 | Maize | cytosol, mitochondrion, plastid | 54.6 | 47.09 |
| Solyc12g013570.1.1 | Tomato | cytosol | 34.36 | 42.11 |
| Solyc05g009620.2.1 | Tomato | plastid | 20.86 | 34.69 |
| Solyc03g120600.2.1 | Tomato | cytosol, peroxisome, plastid | 32.52 | 30.81 |
| Solyc06g066590.2.1 | Tomato | cytosol, nucleus, peroxisome | 34.36 | 30.6 |
| Solyc10g081410.1.1 | Tomato | cytosol | 34.36 | 29.79 |
| Solyc08g013920.2.1 | Tomato | cytosol, plasma membrane, plastid | 38.65 | 28.77 |
| Solyc08g013910.2.1 | Tomato | cytosol | 28.83 | 25.27 |
| Solyc03g119660.1.1 | Tomato | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 42.33 | 16.67 |
Protein Annotations
| EnsemblPlants:Solyc02g090730.2.1 | EnsemblPlantsGene:Solyc02g090730.2 | InterPro:PLAC_motif_containing | PANTHER:PTHR15907 | PANTHER:PTHR15907:SF92 | PFAM:PF04749 |
| ProteinID:AAF74286.1 | ProteinID:AAO12185.1 | ProteinID:AAO12186.1 | ProteinID:AAO12187.1 | ProteinID:AAO12188.1 | TIGRFAMs:TIGR01571 |
| UniParc:UPI00000AC46E | UniProt:Q9LKV7 | MapMan:35.1 | : | : | : |
Description
Fw2.2 [Source:UniProtKB/TrEMBL;Acc:Q9LKV7]
Coordinates
chr2:+:52252557..52253347
Molecular Weight (calculated)
18061.8 Da
IEP (calculated)
7.524
GRAVY (calculated)
-0.196
Length
163 amino acids
Sequence
(BLAST)
(BLAST)
001: MYQTVGYNPG PMKQPYVPPH YVSAPGTTTA RWSTGLCHCF DDPANCLVTS VCPCITFGQI SEILNKGTTS CGSRGALYCL LGLTGLPSLY SCFYRSKMRG
101: QYDLEEAPCV DCLVHVFCEP CALCQEYREL KNRGFDMGIG WQANMDRQSR GVTMPPYHAG MTR
101: QYDLEEAPCV DCLVHVFCEP CALCQEYREL KNRGFDMGIG WQANMDRQSR GVTMPPYHAG MTR
001: MEAQHLHAKP HAEGEWSTGF CDCFSDCKNC CITFWCPCIT FGQVAEIVDR GSTSCGTAGA LYALIAVVTG CACIYSCFYR GKMRAQYNIK GDDCTDCLKH
101: FCCELCSLTQ QYRELKHRGY DMSLGWAGNV ERQQNQGGVA MGAPVFQGGM TR
101: FCCELCSLTQ QYRELKHRGY DMSLGWAGNV ERQQNQGGVA MGAPVFQGGM TR
Arabidopsis Description
PCR2PCR2 [Source:UniProtKB/TrEMBL;Acc:A0A178WDU8]
SUBAcon: [mitochondrion,plasma membrane,cytosol]
SUBAcon: [mitochondrion,plasma membrane,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.