Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 3
- plasma membrane 3
- golgi 2
- plastid 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400014896 | Potato | nucleus, plastid | 74.19 | 36.41 |
| Solyc12g037950.1.1 | Tomato | extracellular | 26.34 | 32.89 |
| Solyc01g005470.2.1 | Tomato | extracellular | 26.34 | 29.88 |
| Solyc02g090730.2.1 | Tomato | plastid | 25.27 | 28.83 |
| Solyc08g013920.2.1 | Tomato | cytosol, plasma membrane, plastid | 33.87 | 28.77 |
| Solyc12g013570.1.1 | Tomato | cytosol | 20.43 | 28.57 |
| Solyc03g120600.2.1 | Tomato | cytosol, peroxisome, plastid | 26.34 | 28.49 |
| Solyc06g066590.2.1 | Tomato | cytosol, nucleus, peroxisome | 26.88 | 27.32 |
| Solyc04g007900.2.1 | Tomato | nucleus | 25.27 | 25.27 |
| Solyc05g009620.2.1 | Tomato | plastid | 11.83 | 22.45 |
| Solyc10g081410.1.1 | Tomato | cytosol | 18.28 | 18.09 |
| Solyc03g119660.1.1 | Tomato | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 26.34 | 11.84 |
Protein Annotations
| EnsemblPlants:Solyc08g013910.2.1 | EnsemblPlantsGene:Solyc08g013910.2 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:PLAC_motif_containing |
| PANTHER:PTHR15907 | PANTHER:PTHR15907:SF92 | PFAM:PF04749 | SEG:seg | TIGRFAMs:TIGR01571 | TMHMM:TMhelix |
| UniParc:UPI000276B08E | UniProt:K4CJ25 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr8:+:3392447..3394462
Molecular Weight (calculated)
21461.2 Da
IEP (calculated)
8.659
GRAVY (calculated)
-0.075
Length
186 amino acids
Sequence
(BLAST)
(BLAST)
001: MGVPPPFPPH FPMPFPHDQF HSFHHPMLHG NNNNNISNGQ IYSQPWSTGL FDCFSDIKNC FITCLCPCVT FGQVDEILSQ GQMTWWEAAL MFGLLEAFCC
101: QASLVFAWYH RVQFRKKYNL MGNLFSEFAI TLICMRLVLC QNYRQLNKLG FDVALGWKAN KKKQRRIASQ NAVQFVPPMA NPGMFR
101: QASLVFAWYH RVQFRKKYNL MGNLFSEFAI TLICMRLVLC QNYRQLNKLG FDVALGWKAN KKKQRRIASQ NAVQFVPPMA NPGMFR
001: MASQHLQANP HAEGEWSTGF CDCFSDCQNC CITWLCPCIT FGQVADIVDR GNTSCGTAGA LYVLLAAITG CGCLYSCIYR GKIRAQYNIR GDGCTDCLKH
101: FCCELCALTQ EYRELKHRGF DMSLGWAGNV EKQQNQGGVA MGAPAFQGGM SR
101: FCCELCALTQ EYRELKHRGF DMSLGWAGNV EKQQNQGGVA MGAPAFQGGM SR
Arabidopsis Description
PCR3Protein PLANT CADMIUM RESISTANCE 3 [Source:UniProtKB/Swiss-Prot;Acc:P0CW97]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.