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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 3
  • golgi 2
  • cytosol 1
  • plastid 1
  • peroxisome 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400006535 Potato cytosol, extracellular, plastid 68.02 97.5
Solyc06g066590.2.1 Tomato cytosol, nucleus, peroxisome 74.42 69.95
KRH09890 Soybean cytosol 65.12 66.67
VIT_09s0002g04180.t01 Wine grape cytosol 63.95 56.99
Bra018953.1-P Field mustard plastid 61.63 56.38
AT1G52200.1 Thale cress plastid 62.21 56.32
Solyc01g005470.2.1 Tomato extracellular 35.47 37.2
Solyc12g013570.1.1 Tomato cytosol 27.91 36.09
Solyc12g037950.1.1 Tomato extracellular 29.65 34.23
Solyc05g009620.2.1 Tomato plastid 19.19 33.67
Solyc02g090730.2.1 Tomato plastid 30.81 32.52
Solyc04g007900.2.1 Tomato nucleus 33.14 30.65
GSMUA_Achr5P22960_001 Banana plastid 47.67 30.48
Solyc08g013910.2.1 Tomato cytosol 28.49 26.34
Solyc10g081410.1.1 Tomato cytosol 26.74 24.47
Solyc08g013920.2.1 Tomato cytosol, plasma membrane, plastid 29.65 23.29
GSMUA_Achr10P... Banana extracellular, plasma membrane 51.16 21.05
Solyc03g119660.1.1 Tomato cytosol, endoplasmic reticulum, mitochondrion, nucleus 41.86 17.39
Protein Annotations
EnsemblPlants:Solyc03g120600.2.1EnsemblPlantsGene:Solyc03g120600.2InterPro:PLAC_motif_containingPANTHER:PTHR15907PANTHER:PTHR15907:SF46PFAM:PF04749
SEG:segTIGRFAMs:TIGR01571UniParc:UPI0002766D6DUniProt:K4BMK9MapMan:35.1:
Description
No Description!
Coordinates
chr3:-:68956276..68957376
Molecular Weight (calculated)
19082.8 Da
IEP (calculated)
5.076
GRAVY (calculated)
-0.202
Length
172 amino acids
Sequence
(BLAST)
001: MGRVDSSNET ENAQPVGGVP NPSYQGAYAP TLTGTPWSTG LFDCHLDQTN AAMTALFPCL TFGQIAEVQD AGEMTCPLGS FMYLLMMPAV CSQWIMGSKY
101: RTKLRQRYNL VEAPYSDVVS HIFCPFCSLC QEFRELRIRG LDPALGWNGI VAQQQYGNQQ MNQAPSVQSM YK
Best Arabidopsis Sequence Match ( AT1G52200.1 )
(BLAST)
001: MGRVTTPSEE DSNNGLPVQQ PGTPNQRTRV PVSQFAPPNY QQANVNLSVG RPWSTGLFDC QADQANAVLT TIVPCVTFGQ IAEVMDEGEM TCPLGTFMYL
101: LMMPALCSHW VMGSKYREKM RRKFNLVEAP YSDCASHVLC PCCSLCQEYR ELKIRNLDPS LGWNGILAQG QGQYEREAPS FAPTNQYMSK
Arabidopsis Description
PCR8Protein PLANT CADMIUM RESISTANCE 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9M815]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.