Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 3
- golgi 2
- cytosol 1
- plastid 1
- peroxisome 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
PGSC0003DMT400006535 | Potato | cytosol, extracellular, plastid | 68.02 | 97.5 |
Solyc06g066590.2.1 | Tomato | cytosol, nucleus, peroxisome | 74.42 | 69.95 |
KRH09890 | Soybean | cytosol | 65.12 | 66.67 |
VIT_09s0002g04180.t01 | Wine grape | cytosol | 63.95 | 56.99 |
Bra018953.1-P | Field mustard | plastid | 61.63 | 56.38 |
AT1G52200.1 | Thale cress | plastid | 62.21 | 56.32 |
Solyc01g005470.2.1 | Tomato | extracellular | 35.47 | 37.2 |
Solyc12g013570.1.1 | Tomato | cytosol | 27.91 | 36.09 |
Solyc12g037950.1.1 | Tomato | extracellular | 29.65 | 34.23 |
Solyc05g009620.2.1 | Tomato | plastid | 19.19 | 33.67 |
Solyc02g090730.2.1 | Tomato | plastid | 30.81 | 32.52 |
Solyc04g007900.2.1 | Tomato | nucleus | 33.14 | 30.65 |
GSMUA_Achr5P22960_001 | Banana | plastid | 47.67 | 30.48 |
Solyc08g013910.2.1 | Tomato | cytosol | 28.49 | 26.34 |
Solyc10g081410.1.1 | Tomato | cytosol | 26.74 | 24.47 |
Solyc08g013920.2.1 | Tomato | cytosol, plasma membrane, plastid | 29.65 | 23.29 |
GSMUA_Achr10P... | Banana | extracellular, plasma membrane | 51.16 | 21.05 |
Solyc03g119660.1.1 | Tomato | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 41.86 | 17.39 |
Protein Annotations
EnsemblPlants:Solyc03g120600.2.1 | EnsemblPlantsGene:Solyc03g120600.2 | InterPro:PLAC_motif_containing | PANTHER:PTHR15907 | PANTHER:PTHR15907:SF46 | PFAM:PF04749 |
SEG:seg | TIGRFAMs:TIGR01571 | UniParc:UPI0002766D6D | UniProt:K4BMK9 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr3:-:68956276..68957376
Molecular Weight (calculated)
19082.8 Da
IEP (calculated)
5.076
GRAVY (calculated)
-0.202
Length
172 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRVDSSNET ENAQPVGGVP NPSYQGAYAP TLTGTPWSTG LFDCHLDQTN AAMTALFPCL TFGQIAEVQD AGEMTCPLGS FMYLLMMPAV CSQWIMGSKY
101: RTKLRQRYNL VEAPYSDVVS HIFCPFCSLC QEFRELRIRG LDPALGWNGI VAQQQYGNQQ MNQAPSVQSM YK
101: RTKLRQRYNL VEAPYSDVVS HIFCPFCSLC QEFRELRIRG LDPALGWNGI VAQQQYGNQQ MNQAPSVQSM YK
001: MGRVTTPSEE DSNNGLPVQQ PGTPNQRTRV PVSQFAPPNY QQANVNLSVG RPWSTGLFDC QADQANAVLT TIVPCVTFGQ IAEVMDEGEM TCPLGTFMYL
101: LMMPALCSHW VMGSKYREKM RRKFNLVEAP YSDCASHVLC PCCSLCQEYR ELKIRNLDPS LGWNGILAQG QGQYEREAPS FAPTNQYMSK
101: LMMPALCSHW VMGSKYREKM RRKFNLVEAP YSDCASHVLC PCCSLCQEYR ELKIRNLDPS LGWNGILAQG QGQYEREAPS FAPTNQYMSK
Arabidopsis Description
PCR8Protein PLANT CADMIUM RESISTANCE 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9M815]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.