Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 3
- golgi 2
- nucleus 1
- plastid 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400056038 | Potato | cytosol, extracellular, plastid | 94.63 | 94.63 |
| Zm00001d000070_P001 | Maize | cytosol, extracellular, plastid | 46.31 | 47.92 |
| Os06t0520733-00 | Rice | extracellular | 34.9 | 46.02 |
| Solyc02g090730.2.1 | Tomato | plastid | 50.34 | 46.01 |
| AT1G58320.1 | Thale cress | cytosol | 45.64 | 45.95 |
| Solyc05g009620.2.1 | Tomato | plastid | 30.2 | 45.92 |
| Solyc01g005470.2.1 | Tomato | extracellular | 48.99 | 44.51 |
| Solyc12g013570.1.1 | Tomato | cytosol | 39.6 | 44.36 |
| CDY29143 | Canola | cytosol | 44.3 | 44.0 |
| KRH39230 | Soybean | extracellular | 43.62 | 42.21 |
| Solyc04g007900.2.1 | Tomato | nucleus | 47.65 | 38.17 |
| CDY39895 | Canola | cytosol | 41.61 | 38.04 |
| Os10t0112100-01 | Rice | cytosol, plasma membrane, plastid | 42.95 | 34.41 |
| CDY38687 | Canola | cytosol | 41.61 | 30.39 |
| Bra027875.1-P | Field mustard | cytosol | 43.62 | 30.23 |
| Solyc03g120600.2.1 | Tomato | cytosol, peroxisome, plastid | 34.23 | 29.65 |
| Solyc06g066590.2.1 | Tomato | cytosol, nucleus, peroxisome | 35.57 | 28.96 |
| Solyc08g013920.2.1 | Tomato | cytosol, plasma membrane, plastid | 39.6 | 26.94 |
| Solyc08g013910.2.1 | Tomato | cytosol | 32.89 | 26.34 |
| Solyc10g081410.1.1 | Tomato | cytosol | 30.2 | 23.94 |
| Solyc03g119660.1.1 | Tomato | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 45.64 | 16.43 |
Protein Annotations
| EnsemblPlants:Solyc12g037950.1.1 | EnsemblPlantsGene:Solyc12g037950.1 | InterPro:PLAC_motif_containing | PANTHER:PTHR15907 | PANTHER:PTHR15907:SF94 | PFAM:PF04749 |
| PFscan:PS51257 | SEG:seg | TIGRFAMs:TIGR01571 | UniParc:UPI000276A32D | UniProt:K4DEF0 | MapMan:35.1 |
Description
No Description!
Coordinates
chr12:-:49653233..49659081
Molecular Weight (calculated)
16076.4 Da
IEP (calculated)
7.115
GRAVY (calculated)
0.212
Length
149 amino acids
Sequence
(BLAST)
(BLAST)
001: MSAKSPVIGT PAAGVWTTGL CGCFEDASNC CVTCCCPCVT FGRNVEIIDQ GTTSCAHAGV IYYCLAHVGW ACIYTCTYRT KLRAFFSLPE DPCGDCLVHC
101: CCLPCAVCQE YRELKNRGFD PSLGWMANAQ RWSQAGVSVP PHIAPGMTR
101: CCLPCAVCQE YRELKNRGFD PSLGWMANAQ RWSQAGVSVP PHIAPGMTR
001: MYGNGPVFKA EGTSFRDQPY AEQLPQGLWT TGLCDCHEDA HICVQTAIMP CVSFAQNVEI VNRGTIPCMN AGLIHLALGF IGCSWLYAFP NRSRLREHFA
101: LPEEPCRDFL VHLFCTPCAI CQESRELKNR GADPSIGWLS NVEKWSREKV TPPIVVPGMI R
101: LPEEPCRDFL VHLFCTPCAI CQESRELKNR GADPSIGWLS NVEKWSREKV TPPIVVPGMI R
Arabidopsis Description
PCR12Protein PLANT CADMIUM RESISTANCE 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX26]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.