Factsheet for Bra027875.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
plasma membrane 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY39895	Canola	cytosol	63.72	84.05
AT1G58320.1	Thale cress	cytosol	51.63	75.0
Os06t0520733-00	Rice	extracellular	23.72	45.13
Solyc12g037950.1.1	Tomato	extracellular	30.23	43.62
PGSC0003DMT400056038	Potato	cytosol, extracellular, plastid	29.3	42.28
Bra004025.1-P	Field mustard	cytosol, extracellular, plasma membrane	21.86	41.59
Zm00001d000070_P001	Maize	cytosol, extracellular, plastid	26.51	39.58
Bra022323.1-P	Field mustard	cytosol, extracellular, plasma membrane	28.84	38.51
Bra004328.1-P	Field mustard	plasma membrane	28.37	37.89
Bra026181.1-P	Field mustard	cytosol	26.05	37.09
Bra026796.1-P	Field mustard	cytosol	25.58	36.42
Bra026794.1-P	Field mustard	cytosol, plastid, vacuole	24.65	36.05
KRH39230	Soybean	extracellular	25.58	35.71
Bra004325.1-P	Field mustard	cytosol	26.05	34.36
Bra022322.1-P	Field mustard	cytosol	23.26	28.9
Os10t0112100-01	Rice	cytosol, plasma membrane, plastid	24.65	28.49
Bra018953.1-P	Field mustard	plastid	24.65	28.19
Bra016960.1-P	Field mustard	cytosol	22.33	24.87
Bra018774.1-P	Field mustard	cytosol	24.65	23.45
Bra026795.1-P	Field mustard	extracellular	22.79	22.79

Protein Annotations

EnsemblPlants:Bra027875.1	EnsemblPlants:Bra027875.1-P	EnsemblPlantsGene:Bra027875	Gene3D:1.20.910.10	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:Haem_Oase-like_multi-hlx	InterPro:IPR016084	InterPro:PLAC_motif_containing	PANTHER:PTHR15907	PANTHER:PTHR15907:SF65
PFAM:PF04749	SUPFAM:SSF48613	TIGRFAMs:TIGR01571	TMHMM:TMhelix	UniParc:UPI000254282A	UniProt:M4EGG1
MapMan:7.12.5.2	:	:	:	:	:

Description

AT1G58320 (E=2e-061) | unknown protein

Coordinates

chrA09:+:9495318..9499907

Molecular Weight (calculated)

24826.4 Da

IEP (calculated)

5.359

GRAVY (calculated)

-0.419

Length

215 amino acids

Sequence
(BLAST)

001: MSEHEGKYAM KVTEGQWTTG LYDCFSEDIP TCCFTWFCPC VAFGRIAEIL DKGETGQGFA GLMVVAMSHI GCGWYYASTY RAKLRRQYSL PEEPCSDGAI
101: HFFCCSCALS QEHRELKYRG LDPSLDAAFK NTRMERTNNL GRDLEWFKEQ GYDIPEQLAH CEIYSKYFKD IVENDPPAFI SDFYNIYFAH RASGRKIGTM
201: VSERILDNKE LEFYK

Best Arabidopsis Sequence Match ( AT1G58320.1 )
(BLAST)

001: MSEQEGKNEK KVTEGQWTTG LYDCLSEDIS TCCFTWVCPC VAFGRIAEIL DKGETSRGLA GLMVVAMSSI GCGWYYASKY RAKLRHQYAL PEAPCADGAI
101: HCFCCPCALT QEHRELKHRG LDPSLGWNIE NGGLNSNTPP FVASGMDR

Arabidopsis Description

PCR9Protein PLANT CADMIUM RESISTANCE 9 [Source:UniProtKB/Swiss-Prot;Acc:P0CW98]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.