Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY29143 | Canola | cytosol | 81.08 | 80.0 |
| CDY39895 | Canola | cytosol | 72.3 | 65.64 |
| CDY38687 | Canola | cytosol | 75.0 | 54.41 |
| Bra027875.1-P | Field mustard | cytosol | 75.0 | 51.63 |
| Os06t0520733-00 | Rice | extracellular | 35.14 | 46.02 |
| Solyc12g037950.1.1 | Tomato | extracellular | 45.95 | 45.64 |
| AT3G18470.1 | Thale cress | cytosol, extracellular, vacuole | 40.54 | 45.11 |
| PGSC0003DMT400056038 | Potato | cytosol, extracellular, plastid | 44.59 | 44.3 |
| AT1G68630.1 | Thale cress | cytosol | 45.95 | 42.24 |
| AT5G35525.1 | Thale cress | cytosol | 43.24 | 42.11 |
| Zm00001d000070_P001 | Maize | cytosol, extracellular, plastid | 40.54 | 41.67 |
| KRH39230 | Soybean | extracellular | 41.22 | 39.61 |
| AT1G14870.1 | Thale cress | cytosol, mitochondrion, plasma membrane | 40.54 | 39.47 |
| AT1G68610.1 | Thale cress | cytosol | 42.57 | 39.38 |
| AT1G14880.1 | Thale cress | cytosol | 39.86 | 39.07 |
| Os10t0112100-01 | Rice | cytosol, plasma membrane, plastid | 39.19 | 31.18 |
| AT1G52200.1 | Thale cress | plastid | 39.19 | 30.53 |
| AT3G18460.1 | Thale cress | cytosol, extracellular, nucleus, plastid | 37.84 | 30.43 |
| AT3G18450.1 | Thale cress | plastid | 37.84 | 30.43 |
| AT1G49030.1 | Thale cress | cytosol | 39.86 | 26.34 |
| AT2G40935.9 | Thale cress | cytosol | 30.41 | 23.68 |
Protein Annotations
| MapMan:35.1 | EntrezGene:842201 | UniProt:A0A178W288 | EMBL:AC008051 | ProteinID:AEE33535.1 | ArrayExpress:AT1G58320 |
| EnsemblPlantsGene:AT1G58320 | RefSeq:AT1G58320 | TAIR:AT1G58320 | RefSeq:AT1G58320-TAIR-G | EnsemblPlants:AT1G58320.1 | TAIR:AT1G58320.1 |
| GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | RefSeq:NP_176128.1 | ProteinID:OAP12629.1 | UniProt:P0CW98 |
| PFAM:PF04749 | InterPro:PLAC_motif_containing | PANTHER:PTHR15907 | PANTHER:PTHR15907:SF65 | TIGRFAMs:TIGR01571 | TMHMM:TMhelix |
| UniParc:UPI0000163183 | : | : | : | : | : |
Description
PCR9Protein PLANT CADMIUM RESISTANCE 9 [Source:UniProtKB/Swiss-Prot;Acc:P0CW98]
Coordinates
chr1:-:21633858..21635344
Molecular Weight (calculated)
16260.4 Da
IEP (calculated)
6.084
GRAVY (calculated)
-0.255
Length
148 amino acids
Sequence
(BLAST)
(BLAST)
001: MSEQEGKNEK KVTEGQWTTG LYDCLSEDIS TCCFTWVCPC VAFGRIAEIL DKGETSRGLA GLMVVAMSSI GCGWYYASKY RAKLRHQYAL PEAPCADGAI
101: HCFCCPCALT QEHRELKHRG LDPSLGWNIE NGGLNSNTPP FVASGMDR
101: HCFCCPCALT QEHRELKHRG LDPSLGWNIE NGGLNSNTPP FVASGMDR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.