Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 3
- cytosol 1
- mitochondrion 2
- extracellular 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G18460.1 | Thale cress | cytosol, extracellular, nucleus, plastid | 74.46 | 74.46 |
| CDX92237 | Canola | cytosol | 67.93 | 72.25 |
| Bra022322.1-P | Field mustard | cytosol | 67.39 | 71.68 |
| CDY70500 | Canola | cytosol | 55.98 | 66.45 |
| AT3G18470.1 | Thale cress | cytosol, extracellular, vacuole | 36.96 | 51.13 |
| AT1G49030.1 | Thale cress | cytosol | 54.35 | 44.64 |
| AT5G35525.1 | Thale cress | cytosol | 35.87 | 43.42 |
| AT1G14870.1 | Thale cress | cytosol, mitochondrion, plasma membrane | 33.7 | 40.79 |
| AT1G14880.1 | Thale cress | cytosol | 32.07 | 39.07 |
| AT1G68630.1 | Thale cress | cytosol | 33.15 | 37.89 |
| AT1G58320.1 | Thale cress | cytosol | 30.43 | 37.84 |
| AT1G52200.1 | Thale cress | plastid | 35.87 | 34.74 |
| AT1G68610.1 | Thale cress | cytosol | 28.26 | 32.5 |
| VIT_17s0000g03960.t01 | Wine grape | cytosol, nucleus, plastid | 42.39 | 24.92 |
| VIT_14s0006g03190.t01 | Wine grape | cytosol, nucleus, plastid | 41.85 | 24.44 |
| AT2G40935.9 | Thale cress | cytosol | 25.0 | 24.21 |
| Solyc03g119660.1.1 | Tomato | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 45.65 | 20.29 |
| PGSC0003DMT400014354 | Potato | cytosol, endoplasmic reticulum, nucleus | 45.11 | 19.39 |
Protein Annotations
| MapMan:35.1 | EntrezGene:821374 | ProteinID:AEE76099.1 | ArrayExpress:AT3G18450 | EnsemblPlantsGene:AT3G18450 | RefSeq:AT3G18450 |
| TAIR:AT3G18450 | RefSeq:AT3G18450-TAIR-G | EnsemblPlants:AT3G18450.1 | TAIR:AT3G18450.1 | Unigene:At.5476 | ProteinID:BAB01111.1 |
| EMBL:BT010855 | EMBL:BT011321 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | RefSeq:NP_188474.1 |
| PFAM:PF04749 | InterPro:PLAC_motif_containing | PO:PO:0009005 | PANTHER:PTHR15907 | PANTHER:PTHR15907:SF49 | UniProt:Q9LS45 |
| TIGRFAMs:TIGR01571 | TMHMM:TMhelix | UniParc:UPI00000A329A | : | : | : |
Description
PCR5Protein PLANT CADMIUM RESISTANCE 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LS45]
Coordinates
chr3:-:6331033..6332259
Molecular Weight (calculated)
20104.0 Da
IEP (calculated)
7.012
GRAVY (calculated)
-0.232
Length
184 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRPVGQTNQ AQPSVQHTAS PSNKVSHNGG IGKPANIPTG IPVNYQQTQN QWSSQLFDCM NDSENAVITL IAPCVTFGQI AEIVDEGATP CATAGLLYGA
101: LFFTGASFVY SYMFRARIRK KFGLPDAPAP DWITHLVCMP FALCQEYREL KHHGFDPILG WAGNVQQAQQ QEMMTPPTGQ RMMG
101: LFFTGASFVY SYMFRARIRK KFGLPDAPAP DWITHLVCMP FALCQEYREL KHHGFDPILG WAGNVQQAQQ QEMMTPPTGQ RMMG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.