Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G14870.1 | Thale cress | cytosol, mitochondrion, plasma membrane | 83.55 | 83.55 |
| AT1G14880.1 | Thale cress | cytosol | 80.26 | 80.79 |
| Bra026796.1-P | Field mustard | cytosol | 77.63 | 78.15 |
| CDY71864 | Canola | cytosol | 76.97 | 77.48 |
| CDY33732 | Canola | cytosol | 76.97 | 77.48 |
| CDX81680 | Canola | cytosol | 76.32 | 76.82 |
| CDY45296 | Canola | cytosol | 76.32 | 76.82 |
| Bra026181.1-P | Field mustard | cytosol | 76.32 | 76.82 |
| CDY33731 | Canola | cytosol | 75.66 | 76.16 |
| CDY51779 | Canola | endoplasmic reticulum, extracellular | 49.34 | 75.76 |
| KRH47639 | Soybean | endoplasmic reticulum, extracellular | 38.16 | 63.04 |
| KRH41677 | Soybean | extracellular | 61.18 | 53.14 |
| KRH60380 | Soybean | plastid | 60.53 | 49.46 |
| Bra026795.1-P | Field mustard | extracellular | 65.79 | 46.51 |
| KRH60379 | Soybean | cytosol, plastid, vacuole | 57.24 | 45.55 |
| AT3G18470.1 | Thale cress | cytosol, extracellular, vacuole | 38.82 | 44.36 |
| PGSC0003DMT400075916 | Potato | cytosol, endoplasmic reticulum, nucleus | 55.26 | 44.21 |
| Solyc04g007900.2.1 | Tomato | nucleus | 53.95 | 44.09 |
| AT1G68610.1 | Thale cress | cytosol | 46.05 | 43.75 |
| AT1G58320.1 | Thale cress | cytosol | 42.11 | 43.24 |
| VIT_01s0011g05450.t01 | Wine grape | mitochondrion | 53.95 | 36.77 |
| AT3G18460.1 | Thale cress | cytosol, extracellular, nucleus, plastid | 43.42 | 35.87 |
| AT3G18450.1 | Thale cress | plastid | 43.42 | 35.87 |
| AT1G68630.1 | Thale cress | cytosol | 37.5 | 35.4 |
| AT1G52200.1 | Thale cress | plastid | 37.5 | 30.0 |
| AT1G49030.1 | Thale cress | cytosol | 42.11 | 28.57 |
| AT2G40935.9 | Thale cress | cytosol | 32.89 | 26.32 |
| Os02t0286933-00 | Rice | cytosol, nucleus, plastid | 7.24 | 9.91 |
Protein Annotations
| MapMan:35.1 | EntrezGene:833517 | UniProt:A0A178US35 | EMBL:AB015477 | ProteinID:AED93976.1 | ArrayExpress:AT5G35525 |
| EnsemblPlantsGene:AT5G35525 | RefSeq:AT5G35525 | TAIR:AT5G35525 | RefSeq:AT5G35525-TAIR-G | EnsemblPlants:AT5G35525.1 | TAIR:AT5G35525.1 |
| GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | RefSeq:NP_680337.2 | ProteinID:OAO95511.1 | UniProt:P0CW97 |
| PFAM:PF04749 | InterPro:PLAC_motif_containing | PO:PO:0000293 | PANTHER:PTHR15907 | PANTHER:PTHR15907:SF92 | TIGRFAMs:TIGR01571 |
| TMHMM:TMhelix | UniParc:UPI000034F28A | : | : | : | : |
Description
PCR3Protein PLANT CADMIUM RESISTANCE 3 [Source:UniProtKB/Swiss-Prot;Acc:P0CW97]
Coordinates
chr5:+:13707035..13708040
Molecular Weight (calculated)
16473.7 Da
IEP (calculated)
6.455
GRAVY (calculated)
-0.068
Length
152 amino acids
Sequence
(BLAST)
(BLAST)
001: MASQHLQANP HAEGEWSTGF CDCFSDCQNC CITWLCPCIT FGQVADIVDR GNTSCGTAGA LYVLLAAITG CGCLYSCIYR GKIRAQYNIR GDGCTDCLKH
101: FCCELCALTQ EYRELKHRGF DMSLGWAGNV EKQQNQGGVA MGAPAFQGGM SR
101: FCCELCALTQ EYRELKHRGF DMSLGWAGNV EKQQNQGGVA MGAPAFQGGM SR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.