Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra026181.1-P | Field mustard | cytosol | 100.0 | 100.0 |
| CDY51779 | Canola | endoplasmic reticulum, extracellular | 62.91 | 95.96 |
| CDY33732 | Canola | cytosol | 92.72 | 92.72 |
| CDY71864 | Canola | cytosol | 92.05 | 92.05 |
| CDY33731 | Canola | cytosol | 88.08 | 88.08 |
| CDX81680 | Canola | cytosol | 86.75 | 86.75 |
| AT1G14870.1 | Thale cress | cytosol, mitochondrion, plasma membrane | 84.11 | 83.55 |
| AT1G14880.1 | Thale cress | cytosol | 76.82 | 76.82 |
| AT5G35525.1 | Thale cress | cytosol | 76.82 | 76.32 |
| CDX81682 | Canola | cytosol, plastid, vacuole | 67.55 | 69.39 |
| CDY33730 | Canola | cytosol | 63.58 | 63.58 |
| KRH47639 | Soybean | endoplasmic reticulum, extracellular | 37.75 | 61.96 |
| CDX81681 | Canola | cytosol, plasma membrane, plastid | 63.58 | 59.26 |
| KRH41677 | Soybean | extracellular | 60.26 | 52.0 |
| KRH60380 | Soybean | plastid | 62.91 | 51.08 |
| KRH60379 | Soybean | cytosol, plastid, vacuole | 60.26 | 47.64 |
| Solyc04g007900.2.1 | Tomato | nucleus | 57.62 | 46.77 |
| PGSC0003DMT400075916 | Potato | cytosol, endoplasmic reticulum, nucleus | 58.28 | 46.32 |
| CDX96001 | Canola | cytosol | 46.36 | 42.94 |
| CDX92238 | Canola | plasma membrane | 37.09 | 42.11 |
| CDY24480 | Canola | cytosol, extracellular, vacuole | 37.09 | 42.11 |
| CDY29143 | Canola | cytosol | 40.4 | 40.67 |
| VIT_01s0011g05450.t01 | Wine grape | mitochondrion | 58.94 | 39.91 |
| CDY62851 | Canola | cytosol, extracellular, plasma membrane | 41.06 | 39.49 |
| CDX92237 | Canola | cytosol | 44.37 | 38.73 |
| CDY70500 | Canola | cytosol | 39.07 | 38.06 |
| CDY48592 | Canola | plastid | 42.38 | 36.57 |
| CDY39895 | Canola | cytosol | 37.09 | 34.36 |
| CDY07373 | Canola | cytosol | 35.1 | 32.92 |
| CDY04241 | Canola | cytosol | 35.1 | 32.92 |
| CDY71552 | Canola | plastid | 43.71 | 32.67 |
| CDY38607 | Canola | plasma membrane | 33.11 | 31.06 |
| CDX96000 | Canola | plasma membrane | 33.11 | 31.06 |
| CDY62854 | Canola | cytosol | 43.71 | 30.28 |
| CDY53672 | Canola | cytosol | 33.77 | 27.27 |
| CDY57571 | Canola | cytosol | 34.44 | 27.08 |
| CDY38687 | Canola | cytosol | 36.42 | 26.96 |
| CDY57415 | Canola | cytosol | 33.77 | 26.42 |
| CDY06953 | Canola | cytosol | 33.77 | 26.42 |
| Os02t0286933-00 | Rice | cytosol, nucleus, plastid | 7.95 | 10.81 |
Protein Annotations
| EnsemblPlants:CDY45296 | EnsemblPlantsGene:GSBRNA2T00081741001 | GO:A0A078I5W3 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:PLAC_motif_containing | PANTHER:PTHR15907 | PANTHER:PTHR15907:SF92 | PFAM:PF04749 | ProteinID:CDY45296 | ProteinID:CDY45296.1 |
| TIGRFAMs:TIGR01571 | TMHMM:TMhelix | UniParc:UPI000253EFB2 | UniProt:A0A078I5W3 | MapMan:35.1 | : |
Description
BnaA06g09660DBnaA06g09660D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I5W3]
Coordinates
chrLK032619:-:184155..185239
Molecular Weight (calculated)
16519.7 Da
IEP (calculated)
6.197
GRAVY (calculated)
-0.129
Length
151 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAKHLHGQP QAEGEWSTGF CDCFSDCGNC CITCWCPCIT FGQVAEIVDQ GSTTCGTAGA LYTLISFFTG CGCLYSCFYR GKMRAQYNIG GNDCGDCLKH
101: FFCELCALTQ QYRELKNRGY DMKLGWAGNA QLQQNQGVAM GAPVFQGGMT R
101: FFCELCALTQ QYRELKNRGY DMKLGWAGNA QLQQNQGVAM GAPVFQGGMT R
001: MEAQHLHAKP HAEGEWSTGF CDCFSDCKNC CITFWCPCIT FGQVAEIVDR GSTSCGTAGA LYALIAVVTG CACIYSCFYR GKMRAQYNIK GDDCTDCLKH
101: FCCELCSLTQ QYRELKHRGY DMSLGWAGNV ERQQNQGGVA MGAPVFQGGM TR
101: FCCELCSLTQ QYRELKHRGY DMSLGWAGNV ERQQNQGGVA MGAPVFQGGM TR
Arabidopsis Description
PCR2PCR2 [Source:UniProtKB/TrEMBL;Acc:A0A178WDU8]
SUBAcon: [mitochondrion,plasma membrane,cytosol]
SUBAcon: [mitochondrion,plasma membrane,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.