CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX81682	Canola	cytosol, plastid, vacuole	72.85	74.83
CDY33731	Canola	cytosol	64.9	64.9
CDX81680	Canola	cytosol	64.24	64.24
CDY45296	Canola	cytosol	63.58	63.58
CDY71864	Canola	cytosol	63.58	63.58
CDY33732	Canola	cytosol	63.58	63.58
CDX81681	Canola	cytosol, plasma membrane, plastid	65.56	61.11
CDY51779	Canola	endoplasmic reticulum, extracellular	38.41	58.59
KRH47639	Soybean	endoplasmic reticulum, extracellular	33.11	54.35
KRH41677	Soybean	extracellular	53.64	46.29
CDX96001	Canola	cytosol	49.01	45.4
KRH60380	Soybean	plastid	55.63	45.16
KRH60379	Soybean	cytosol, plastid, vacuole	52.98	41.88
Solyc04g007900.2.1	Tomato	nucleus	50.33	40.86
PGSC0003DMT400075916	Potato	cytosol, endoplasmic reticulum, nucleus	50.99	40.53
CDY24480	Canola	cytosol, extracellular, vacuole	35.1	39.85
CDX92238	Canola	plasma membrane	35.1	39.85
VIT_01s0011g05450.t01	Wine grape	mitochondrion	52.32	35.43
CDY29143	Canola	cytosol	35.1	35.33
CDY62851	Canola	cytosol, extracellular, plasma membrane	34.44	33.12
CDY70500	Canola	cytosol	32.45	31.61
CDX92237	Canola	cytosol	35.76	31.21
CDY48592	Canola	plastid	35.76	30.86
CDY04241	Canola	cytosol	30.46	28.57
CDY07373	Canola	cytosol	30.46	28.57
CDY39895	Canola	cytosol	30.46	28.22
CDY38607	Canola	plasma membrane	28.48	26.71
CDX96000	Canola	plasma membrane	28.48	26.71
CDY71552	Canola	plastid	35.1	26.24
CDY38687	Canola	cytosol	33.77	25.0
CDY62854	Canola	cytosol	35.1	24.31
CDY57571	Canola	cytosol	29.14	22.92
CDY06953	Canola	cytosol	29.14	22.8
CDY57415	Canola	cytosol	29.14	22.8
CDY53672	Canola	cytosol	27.81	22.46
Os02t0286933-00	Rice	cytosol, nucleus, plastid	5.96	8.11

Protein Annotations

EnsemblPlants:CDY33730	EnsemblPlantsGene:GSBRNA2T00055140001	InterPro:PLAC_motif_containing	PANTHER:PTHR15907	PANTHER:PTHR15907:SF92	PFAM:PF04749
ProteinID:CDY33730	ProteinID:CDY33730.1	SEG:seg	TIGRFAMs:TIGR01571	UniParc:UPI0001D8401F	UniProt:A0A078H541
MapMan:35.1	:	:	:	:	:

Description

BnaA09g45360DBnaA09g45360D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H541]

Coordinates

chrLK032321:+:42775..43934

Molecular Weight (calculated)

16472.0 Da

IEP (calculated)

7.994

GRAVY (calculated)

-0.052

Length

151 amino acids

Sequence
(BLAST)

001: MGRVMEVKGK PQADGEWSTG FCGCCSDCSS CCLTCWCPCI TVGRIAEIVD QGSSSCCATG ALYMLSMYTV FGSACISCKY RTKMRKQYNL KGSECGDYLK
101: HFFCELCALT QTYRELTKRG FDVPLGWDGN VARHNAGVAM GAPVVEGGMR R

Best Arabidopsis Sequence Match ( AT1G14870.1 )
(BLAST)

001: MEAQHLHAKP HAEGEWSTGF CDCFSDCKNC CITFWCPCIT FGQVAEIVDR GSTSCGTAGA LYALIAVVTG CACIYSCFYR GKMRAQYNIK GDDCTDCLKH
101: FCCELCSLTQ QYRELKHRGY DMSLGWAGNV ERQQNQGGVA MGAPVFQGGM TR

Arabidopsis Description

PCR2PCR2 [Source:UniProtKB/TrEMBL;Acc:A0A178WDU8]
SUBAcon: [mitochondrion,plasma membrane,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.