Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY71864 | Canola | cytosol | 98.68 | 98.68 |
| CDY33732 | Canola | cytosol | 98.68 | 98.68 |
| Bra026181.1-P | Field mustard | cytosol | 92.05 | 92.05 |
| AT1G14870.1 | Thale cress | cytosol, mitochondrion, plasma membrane | 87.42 | 86.84 |
| AT1G14880.1 | Thale cress | cytosol | 78.15 | 78.15 |
| AT5G35525.1 | Thale cress | cytosol | 78.15 | 77.63 |
| Bra026794.1-P | Field mustard | cytosol, plastid, vacuole | 68.87 | 70.75 |
| KRH47639 | Soybean | endoplasmic reticulum, extracellular | 38.41 | 63.04 |
| Bra026795.1-P | Field mustard | extracellular | 79.47 | 55.81 |
| KRH41677 | Soybean | extracellular | 60.26 | 52.0 |
| KRH60380 | Soybean | plastid | 62.91 | 51.08 |
| Solyc04g007900.2.1 | Tomato | nucleus | 60.26 | 48.92 |
| KRH60379 | Soybean | cytosol, plastid, vacuole | 61.59 | 48.69 |
| PGSC0003DMT400075916 | Potato | cytosol, endoplasmic reticulum, nucleus | 60.26 | 47.89 |
| Bra004325.1-P | Field mustard | cytosol | 46.36 | 42.94 |
| VIT_01s0011g05450.t01 | Wine grape | mitochondrion | 56.95 | 38.56 |
| Bra004025.1-P | Field mustard | cytosol, extracellular, plasma membrane | 27.81 | 37.17 |
| Bra022322.1-P | Field mustard | cytosol | 42.38 | 36.99 |
| Bra022323.1-P | Field mustard | cytosol, extracellular, plasma membrane | 36.42 | 34.16 |
| Bra004328.1-P | Field mustard | plasma membrane | 32.45 | 30.43 |
| Bra018953.1-P | Field mustard | plastid | 37.75 | 30.32 |
| Bra018774.1-P | Field mustard | cytosol | 45.03 | 30.09 |
| Bra016960.1-P | Field mustard | cytosol | 33.11 | 25.91 |
| Bra027875.1-P | Field mustard | cytosol | 36.42 | 25.58 |
| Os02t0286933-00 | Rice | cytosol, nucleus, plastid | 6.62 | 9.01 |
Protein Annotations
| EnsemblPlants:Bra026796.1 | EnsemblPlants:Bra026796.1-P | EnsemblPlantsGene:Bra026796 | InterPro:PLAC_motif_containing | PANTHER:PTHR15907 | PANTHER:PTHR15907:SF92 |
| PFAM:PF04749 | TIGRFAMs:TIGR01571 | TMHMM:TMhelix | UniParc:UPI0002542D2D | UniProt:M4EDD6 | MapMan:35.1 |
Description
AT1G14870 (E=2e-080) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: plasma membrane; EXPRESSED IN: callus; CONTAINS InterPro DOMAIN/s: EGF-type aspartate/asparagine hydroxylation conserved site (InterPro:IPR000152), Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G35525.1); Has 492 Blast hits to 491 proteins in 78 species: Archae - 0; Bacteria - 0; Metazoa - 93; Fungi - 76; Plants - 297; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink).
Coordinates
chrA09:+:33736564..33737458
Molecular Weight (calculated)
16629.9 Da
IEP (calculated)
7.071
GRAVY (calculated)
-0.151
Length
151 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAQHLHAKP RAEGEWSTGF CDCFSDCKNC CITCWCPCIT FGQVAEIVDQ GSTTCGTAGA LYTLISCFTG CGCIYSCFYR GKMRAQYNIG GNDCGDCLKH
101: FFCELCALTQ QYRELKNRGF NMDLGWAGNV QRQQNQGVAM GAPVFQGGMT R
101: FFCELCALTQ QYRELKNRGF NMDLGWAGNV QRQQNQGVAM GAPVFQGGMT R
001: MEAQHLHAKP HAEGEWSTGF CDCFSDCKNC CITFWCPCIT FGQVAEIVDR GSTSCGTAGA LYALIAVVTG CACIYSCFYR GKMRAQYNIK GDDCTDCLKH
101: FCCELCSLTQ QYRELKHRGY DMSLGWAGNV ERQQNQGGVA MGAPVFQGGM TR
101: FCCELCSLTQ QYRELKHRGY DMSLGWAGNV ERQQNQGGVA MGAPVFQGGM TR
Arabidopsis Description
PCR2PCR2 [Source:UniProtKB/TrEMBL;Acc:A0A178WDU8]
SUBAcon: [mitochondrion,plasma membrane,cytosol]
SUBAcon: [mitochondrion,plasma membrane,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.