Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular, cytosol
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 4
- golgi 2
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY07373 | Canola | cytosol | 100.0 | 70.19 |
| CDY04241 | Canola | cytosol | 98.23 | 68.94 |
| AT1G68630.1 | Thale cress | cytosol | 91.15 | 63.98 |
| Bra004328.1-P | Field mustard | plasma membrane | 84.07 | 59.01 |
| VIT_01s0011g03240.t01 | Wine grape | extracellular, plastid | 58.41 | 38.82 |
| KRH75408 | Soybean | cytosol | 50.44 | 38.26 |
| PGSC0003DMT400033759 | Potato | cytosol | 44.25 | 34.72 |
| Solyc12g013570.1.1 | Tomato | cytosol | 39.82 | 33.83 |
| Zm00001d000070_P001 | Maize | cytosol, extracellular, plastid | 40.71 | 31.94 |
| Os06t0520733-00 | Rice | extracellular | 30.09 | 30.09 |
| Bra026181.1-P | Field mustard | cytosol | 38.05 | 28.48 |
| Bra026796.1-P | Field mustard | cytosol | 37.17 | 27.81 |
| Bra026794.1-P | Field mustard | cytosol, plastid, vacuole | 35.4 | 27.21 |
| Bra004325.1-P | Field mustard | cytosol | 38.94 | 26.99 |
| Bra022323.1-P | Field mustard | cytosol, extracellular, plasma membrane | 35.4 | 24.84 |
| Bra022322.1-P | Field mustard | cytosol | 37.17 | 24.28 |
| Os10t0112100-01 | Rice | cytosol, plasma membrane, plastid | 39.82 | 24.19 |
| Bra027875.1-P | Field mustard | cytosol | 41.59 | 21.86 |
| Bra016960.1-P | Field mustard | cytosol | 32.74 | 19.17 |
| Bra026795.1-P | Field mustard | extracellular | 36.28 | 19.07 |
| Bra018953.1-P | Field mustard | plastid | 30.97 | 18.62 |
| Bra018774.1-P | Field mustard | cytosol | 35.4 | 17.7 |
Protein Annotations
| EnsemblPlants:Bra004025.1 | EnsemblPlants:Bra004025.1-P | EnsemblPlantsGene:Bra004025 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:PLAC_motif_containing | PANTHER:PTHR15907 | PANTHER:PTHR15907:SF65 | PFAM:PF04749 | TIGRFAMs:TIGR01571 | TMHMM:TMhelix |
| UniParc:UPI00025419ED | UniProt:M4CIJ1 | MapMan:35.1 | : | : | : |
Description
AT1G68630 (E=4e-060) | unknown protein
Coordinates
chrA07:-:16375528..16376040
Molecular Weight (calculated)
12769.5 Da
IEP (calculated)
7.244
GRAVY (calculated)
-0.043
Length
113 amino acids
Sequence
(BLAST)
(BLAST)
001: MPCISFAQNT EIVNRGTIPC MDAGLIHLAL GFVGCCWLYA FPNRSRLREH FALPEEPCGD FWVHLFCTSC AICQESRELK NRGADPSISW LSNVEKWSRE
101: KVTPPIVVPG MNR
101: KVTPPIVVPG MNR
001: MYGNGPVFKA EGTSFRDQPY AEQLPQGLWT TGLCDCHEDA HICVQTAIMP CVSFAQNVEI VNRGTIPCMN AGLIHLALGF IGCSWLYAFP NRSRLREHFA
101: LPEEPCRDFL VHLFCTPCAI CQESRELKNR GADPSIGWLS NVEKWSREKV TPPIVVPGMI R
101: LPEEPCRDFL VHLFCTPCAI CQESRELKNR GADPSIGWLS NVEKWSREKV TPPIVVPGMI R
Arabidopsis Description
PCR12Protein PLANT CADMIUM RESISTANCE 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX26]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.